Methanocaldococcus fervens: Mefer_0661
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Entry
Mefer_0661 CDS
T00976
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mfe
Methanocaldococcus fervens
Brite
KEGG Orthology (KO) [BR:
mfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfe03400
]
Mefer_0661
DNA repair and recombination proteins [BR:
mfe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Mefer_0661
Archaeal homologous recombinant proteins
Mefer_0661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
Rad50_zn_hook
AAA_15
AAA_29
SbcC_Walker_B
Occludin_ELL
AAA_21
Baculo_PEP_C
AAA_13
BLOC1_2
AAA_27
ABC_tran
AAA_22
DEAD
ATG17_like
DUF2203
Motif
Other DBs
NCBI-ProteinID:
ACV24480
UniProt:
C7P7E8
LinkDB
All DBs
Position
complement(626021..629044)
Genome browser
AA seq
1007 aa
AA seq
DB search
MIINSITINNFKSHVNTKITFNDGIIAIIGENGSGKSSIFEAMFFALFGADALRRMGLTY
DEIITKGKKAMSVELDFEVNGNSYKVVREYDGRSSAKLYKNNELYAKTVNEVNRAISEIL
GVDKDMFLNSIYIKQGEIANLLNLPPADRKEVIGKLLGIDDFEKCYQKMRDVINEYRNQL
KEVEVNLSYKEKFEKDLKEKENQLAEKEKELERIKANIDKIKTEYETAKKNFVEWKEKKS
LYEKLINKLEEREKALELEKNKLKNLKYDLDEVLKANEILKSHKGEYGEYKSLTNRIKEI
ERRLRDLQPAYEEYIKLSKTLENIEKDIKELKEFVDKSKYKDRLDELNEILESIKKRIEE
VEKTAELLGELEILSQKLNEIEKYKKIANECKKYYEEYLKLEEKINEYNKLNLEYTKLLQ
NKESIEENIKNLNCEIENIEKELNGINIEEIKKSLEEIEKKKEELSQLQKEKEELKQKIG
EINNEINRLKKILDELKDVEGKCPLCKTPIDENKKLDLINSHKSQLDNKYNELEEIKRKI
KEIENEIDKINNEIAKEKQFREIETKYYEKKKRLEDLTLKMNGLKKELIMIENKLSSYIV
NGKPINEILEEYKTKLNEIRDKYNEYISAKNYLDSVDEENLRRNFEDIKEKVKGWFKEKC
KEEIKKLRDEEKEITYLINKIEELKKKENEFKNVENKMLLKLGMYKEYLSLNEALNDCRK
RVEELENIYKICNSAEITLNNIKRKYGKEDIENYINNKILEVNEKIKDIKERIDYINQKL
NEINYSEEEFKKIEEEFEKKQEKLKNAEIEKGKIESEIKYLRDDIETLNLKLKELSDLEK
EKEKLIKFIDYLNKVRSVFGKDGFQKYLRKIYTPLIQKYLNEAFNEFDLPYSFVELTEDL
EIKLHSPTGVLTIDNLSGGEQIAVALSLRLAIANALIGNKVECIILDEPTVYLDENRRAK
LAEIFRKINSVPQMIIITHHRELEEVADTIVNVTKERGVSKVKINES
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgattatcaatagcataacaataaacaactttaaaagccacgttaatacaaaaatcaca
tttaatgatgggataattgcaattatcggagagaacggtagtggaaagtcttcaatattt
gaggcaatgttttttgctttatttggagctgatgctttaagaagaatgggtttaacttat
gatgaaattataactaaaggtaaaaaagcaatgtctgttgagcttgattttgaggttaat
ggaaacagctataaagttgttagggaatatgatggaagaagttcagcaaaactgtataaa
aacaatgaactatatgcaaaaacagttaatgaggttaatagagcaatttctgaaatttta
ggagtagataaagacatgtttttaaattctatatacattaagcagggtgagatagcaaat
cttttaaatcttcctccagctgataggaaagaggttattggaaagcttttggggatagat
gattttgaaaaatgttatcaaaaaatgagggatgttattaatgaatatagaaatcagttg
aaggaggttgaggtaaatctaagctataaagaaaaatttgaaaaagatttaaaagagaaa
gaaaatcaattagctgaaaaagaaaaagagcttgagagaataaaagccaatattgataaa
attaaaactgaatatgagactgctaaaaagaattttgtggaatggaaagagaaaaaatcc
ctgtatgaaaaattgataaacaaacttgaagaaagagaaaaagctttagaactcgaaaaa
aataaacttaagaacttaaaatatgatttagatgaagttttaaaagcaaatgaaatattg
aaatcacataaaggtgaatatggggaatataaatcattaactaacagaattaaagaaatt
gaaagaaggttgagagatttacaaccagcttatgaagaatacataaagttatctaaaaca
ttggaaaacattgagaaggatatcaaagaattaaaggaatttgttgataaaagtaaatat
aaggatagacttgatgagttgaatgaaattttagaaagtataaagaaaaggattgaagaa
gttgaaaaaactgctgaattacttggagaacttgaaattttatctcaaaaacttaatgaa
attgaaaaatacaaaaaaattgcaaatgaatgcaaaaagtattatgaagagtatttgaaa
ttggaagagaaaataaatgaatataataaactaaacttagaatacacaaaattattgcaa
aataaggaatctattgaagaaaatataaagaatctaaattgcgaaattgaaaacattgag
aaagaattaaatggcataaatattgaagaaataaaaaaatcattggaagagattgagaaa
aagaaagaggagttatctcaactacaaaaagagaaagaagagttaaaacaaaaaattgga
gaaattaataatgaaattaataggctgaaaaaaattttagatgagcttaaagatgttgaa
ggaaaatgtccattgtgtaagacaccaatagacgaaaacaaaaagctggatttaataaat
tctcataaatctcaattagacaataaatacaatgaattagaagagataaaaagaaaaatt
aaagaaattgaaaatgaaatagataaaataaataatgaaatagctaaagaaaaacaattt
agggaaattgaaaccaaatattatgaaaaaaagaaacgtctggaagatttaacattaaaa
atgaatgggcttaaaaaagagctaataatgatagaaaacaaattatcttcctatattgta
aatggaaaaccaataaatgaaattttagaagaatataaaacaaaattaaatgaaattagg
gataaatacaacgaatacatatctgcaaagaattatttggatagcgttgacgaagaaaat
cttaggagaaattttgaagatattaaggaaaaggttaaaggttggtttaaagaaaaatgt
aaagaggagattaaaaaacttagagatgaagaaaaagagataacttacttaataaataaa
attgaagagcttaaaaagaaagaaaatgaatttaaaaatgttgaaaataagatgttgttg
aagttgggaatgtataaggaatatttatctttaaatgaggcattaaatgattgtaggaag
agggttgaagagcttgaaaatatatataagatatgcaattcagcagagattactttaaac
aacattaaaagaaaatatggaaaagaagatattgaaaattacataaataacaaaatttta
gaagttaatgaaaaaataaaagatattaaagagagaattgactacataaatcaaaaactc
aatgaaataaattactcagaagaagaatttaaaaagattgaagaagagtttgagaaaaag
caggagaaattaaagaatgctgagatagagaaggggaagatagaatcggaaataaaatat
ctgagagatgatattgaaactttaaatttaaaattaaaagaattatctgacttagaaaaa
gagaaagaaaaattaataaagtttattgattatttaaataaagttagaagtgtatttggc
aaagatgggtttcaaaaataccttaggaagatatataccccactaattcagaagtattta
aatgaggcatttaatgagtttgatttaccatacagctttgtagaacttactgaagacctt
gagataaagcttcactcaccaactggtgttttaacaatagacaatttgagtggtggggag
caaatagcggttgccctctctttaagattagcaatagctaacgctttaattggaaataaa
gttgaatgtattatcttggatgagccaactgtctatttagatgaaaacagaagagctaaa
ttggctgagatatttagaaagataaacagcgttccacagatgataattataacccaccat
agagaattggaagaggttgcagataccatagttaatgttacaaaggagaggggagtttca
aaagttaagattaatgaatcctaa
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