Methanocaldococcus fervens: Mefer_0752
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Entry
Mefer_0752 CDS
T00976
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mfe
Methanocaldococcus fervens
Pathway
mfe04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mfe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Mefer_0752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfe03019
]
Mefer_0752
03009 Ribosome biogenesis [BR:
mfe03009
]
Mefer_0752
04131 Membrane trafficking [BR:
mfe04131
]
Mefer_0752
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mfe04147
]
Mefer_0752
Messenger RNA biogenesis [BR:
mfe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Mefer_0752
Ribosome biogenesis [BR:
mfe03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Mefer_0752
Membrane trafficking [BR:
mfe04131
]
SNARE
SNARE associated proteins
Others
Mefer_0752
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Mefer_0752
Exosome [BR:
mfe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Mefer_0752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_2
AAA_5
TIP49
AAA_14
AAA_33
Vps4_C
AAA_22
nSTAND3
AAA_28
IstB_IS21
DUF815
Sigma54_activat
AAA_18
AAA_17
Mg_chelatase
AAA_7
RNA_helicase
Zeta_toxin
ABC_tran
Sigma54_activ_2
AAA_24
AAA_3
PhoH
TsaE
AAA_lid_PRS2_C
NB-ARC
Parvo_NS1
ATP-synt_ab
NPHP3_N
AAA_30
bpMoxR
SLFN-g3_helicase
ATPase
ResIII
AFG1_ATPase
DUF6674
COG3_N
Baculo_PEP_C
DUF2203
Molydop_binding
Baculo_p24
Glutaredoxin2_C
DUF2383
eIF3_N
Sec3_CC
APG6_N
LOH1CR12
Hormone_1
Motif
Other DBs
NCBI-ProteinID:
ACV24570
UniProt:
C7P7N8
LinkDB
All DBs
Position
701317..704028
Genome browser
AA seq
903 aa
AA seq
DB search
MVKELKVAEAYQGDVGRGIARIDPYTMDELGLKPGDVIEIEGPKGKAYAIVYRGFLEDAG
KGIIRIDGYLRQNAGVAIGDRVKVKKVELKEAKKVVLAPTQPIRFGPGFEDFVKRKIMGQ
VLNKGSRVTIGVLGTALTFVVVSTTPAGPVRVTDFTHVELKEEPVSEIKEAKIPDVTYED
IGGLKEEVRKVREMIELPMRHPELFEKLGIEPPKGVLLVGPPGTGKTLLAKAVANEAGAN
FYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDEIDAIAPKRDEATGEVERRLV
AQLLTLMDGLKGRGQVVVIGATNRPNALDPALRRPGRFDREIVIGVPDREGRKEILQIHT
RNMPLAEDVDLDYLADVTHGFVGADLAALCKEAAMRALRRVLPSIDLEAEEIPKEVLDNL
KVTMDDFKEALKDVEPSAMREVLVEVPNVKWEDIGGLEEVKQELREAVEWPLKAKEVFEK
IGVRPPKGVLLFGPPGTGKTLLAKAVANESGANFISVKGPEIFSKWVGESEKAIREIFRK
ARQSAPCIIFFDEIDAIAPKRGRDLSSAVTDKVVNQLLTELDGMEEPKDVVVIAATNRPD
IIDPALLRPGRLDRVILVPVPDEKARLDIFKIHTRGMNLAEDVDLEELAKKTEGYTGADI
EALCREAAMLAVRKSIGKPWGIETALRDLINYLQGISGTFRAAAVELNSVIKATKEKESA
EAGEFGELKNAVGRIISVLAPAKDKIEAVEKEIDNFLEIINKEDLKPSEKDEANKLAKYL
KDILGKLKEMIDNLYELENKLNTLKEQVSAEEIDEIIKTTQNILHRFTTSLDELKNILKD
IESIRLRISTKDVKIKKEHFMKALEKIKPSVSKEDMRVYEKLAQEYGRATSVEKKKEESK
EVI
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggttaaagaattaaaagttgctgaggcataccaaggagatgtagggaggggtattgcg
agaatagacccttacacaatggatgagctcggattaaagccaggggatgttattgagata
gaagggcctaaaggaaaggcttacgctatagtttataggggtttcttagaagatgctgga
aaaggaattattaggattgatggttatttaagacaaaacgctggagtagctattggagat
agggtgaaagttaagaaggtggagcttaaagaagctaaaaaagttgttttagctccaact
cagccaattagattcggtcctggatttgaagacttcgttaagagaaagataatgggacaa
gtattaaacaaaggttcaagagtcacaattggggttttaggaactgccttaacattcgtt
gtagttagcacaactccagcaggacctgttagagtaacagacttcacacacgttgagttg
aaggaagagccagttagtgaaattaaagaagctaagattccagatgtaacctatgaagat
atcggtggtttgaaagaggaagttagaaaagttagagagatgattgagcttccaatgaga
catccagaattatttgaaaagttgggaattgaaccaccaaaaggagttttattagttggt
cctccaggaactggtaaaacattgttagctaaggcagtagctaacgaagcaggggcaaac
ttctacgttataaatggtccagaaataatgagtaaatatgttggggagacagaggaaaac
ttaagaaagatatttgaagaagctgaagaaaatgctccaagtataatattcattgatgag
attgacgccatagctccaaaaagagatgaagctactggagaagttgaaagaagattagta
gctcagctcttaactttaatggatggattaaagggtagggggcaggtagttgttattgga
gctactaacagaccaaatgcattagacccagcattaagaagaccaggaagattcgataga
gaaattgttattggagttccggacagagaaggaaggaaggaaatattacaaatacacaca
agaaacatgccattagctgaagatgttgatttagactacttagcagatgtaacacacgga
ttcgttggggctgatttagcagcattatgtaaagaggctgcaatgagggctttaagaaga
gtattgccaagtattgacttagaggctgaagagatcccaaaagaagttttagataactta
aaagttacaatggatgacttcaaagaggcattaaaggatgttgagccatcagcaatgaga
gaggttttagttgaagttccaaacgttaagtgggaggacattggaggtttagaggaagtt
aagcaggaattaagggaagctgtagaatggccattgaaagctaaagaagtctttgaaaag
ataggagtaagacctccaaaaggagtattgttgtttggtccaccaggaactggtaaaaca
ttgttagctaaggcagtagctaacgaaagtggggcaaacttcataagcgttaaggggcca
gaaatcttcagcaagtgggttggagagtcagaaaaagctataagagaaatattcagaaag
gcaagacagtcagcaccatgtataatattcttcgatgaaattgacgctatagctccaaaa
agaggtagagacctaagctcagctgttacagacaaggtagttaaccagttattaactgaa
ttggatggaatggaggagccaaaggatgttgttgtcattgcagcaacaaacagaccagat
atcatcgacccagctttattgagaccaggaagattagatagggttatactagtcccagtt
ccagacgaaaaggcaagattagatatattcaagatacacacaagaggtatgaatttagct
gaagacgttgatttagaagagttagctaaaaagacagagggctatacaggggcagatatt
gaggcattatgtagagaggcagcgatgttagcagttaggaaaagtataggaaagccatgg
ggaattgaaacagctttgagagacttaatcaactacctacaaggaatttcagggacattc
agagctgctgcagtagaattaaacagtgtaattaaagctacaaaagaaaaagaatcagct
gaagctggagaattcggcgagttaaagaacgctgttggcagaataattagcgttttagct
ccagctaaagataaaattgaagctgtagagaaagaaattgataacttccttgaaattata
aacaaagaggacttaaaaccatcagagaaagacgaagctaacaaattggcaaaatactta
aaagatatattaggtaagttaaaagaaatgatagacaacctctacgaattagaaaacaag
ctaaataccttaaaagagcaagtttcagctgaagagattgatgaaatcatcaaaacaaca
caaaacatcttacatagattcacaacatcattggatgagttaaagaacatattgaaggat
attgaaagtataaggttaagaatctcaacaaaagacgttaagattaagaaagaacacttc
atgaaagctcttgaaaagattaagccatcagtaagtaaggaagatatgagagtctatgaa
aagttagctcaggaatatggaagagctacatcagttgaaaagaagaaagaagagagtaag
gaagtaatctaa
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