Methanocaldococcus fervens: Mefer_0972
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Entry
Mefer_0972 CDS
T00976
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
mfe
Methanocaldococcus fervens
Brite
KEGG Orthology (KO) [BR:
mfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mfe03016
]
Mefer_0972
Enzymes [BR:
mfe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Mefer_0972
Transfer RNA biogenesis [BR:
mfe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Mefer_0972
Prokaryotic type
Mefer_0972
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ACV24790
UniProt:
C7P8A8
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All DBs
Position
915592..916371
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AA seq
259 aa
AA seq
DB search
MYILKIAYDGRYSFQQQPHKQTVCDILLDTLENTDFLAKKKIIYSGGRTDKGVSALGNFV
VLELKKEPILSYINAKLKSKGIWVLGYREIDEIPKVKYRYYRYILPNINYNVDAIKEGAK
KMIGTHSFHNLSKRDRTKEKSPIRTIYDIKISENEFYLTIDIIGESFLWNMVRKIVGALD
LIGRGKKPVEWIDKLLDENYREGVPTFPPDGLILVEAKVDVDYIYDKYSIKKFKEYWEEF
FKLCVMKLGIAKTVLDYTP
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgtatattctaaaaatcgcctatgacggaagatacagctttcaacaacagccacataaa
caaacagtttgtgatatattattagatacattagaaaatactgattttttagctaaaaag
aaaataatttatagtgggggaaggactgacaaaggcgtctctgcattgggaaattttgtt
gttttagaattaaaaaaagagccaatattatcatatataaatgcaaagttgaaaagtaaa
ggcatttgggttttaggttatagggagattgatgaaattcctaaggtgaagtataggtat
tataggtatatacttccaaacatcaactataacgtagatgcaataaaagaaggggctaag
aagatgattggcactcactcattccataatttatcaaaaagagatagaacaaaggaaaaa
agccctataagaacaatctatgacataaaaatctctgaaaatgagttttatttaactata
gacattattggagagagctttttatggaatatggtcagaaagatagtaggagctttagat
ttaattggtagaggaaaaaaaccagttgaatggattgacaaattgttagatgaaaattat
agagaaggagttcctacatttccaccagatggattaattttggttgaagcaaaggttgat
gttgattacatatatgacaaatattccataaaaaaatttaaggaatattgggaagaattc
tttaaattgtgtgttatgaaattaggcattgctaaaacagttttagattatacgccataa
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