KEGG   Methanocaldococcus fervens: Mefer_1010
Entry
Mefer_1010        CDS       T00976                                 
Name
(GenBank) flap structure-specific endonuclease
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
mfe  Methanocaldococcus fervens
Pathway
mfe03030  DNA replication
mfe03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mfe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Mefer_1010
   03410 Base excision repair
    Mefer_1010
   03450 Non-homologous end-joining
    Mefer_1010
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mfe03032]
    Mefer_1010
   03400 DNA repair and recombination proteins [BR:mfe03400]
    Mefer_1010
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mfe04147]
    Mefer_1010
DNA replication proteins [BR:mfe03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Mefer_1010
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     Mefer_1010
DNA repair and recombination proteins [BR:mfe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Mefer_1010
Exosome [BR:mfe04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Mefer_1010
SSDB
Motif
Pfam: XPG_I XPG_N UVR COG4_N DUF1002 HSCB_C
Other DBs
NCBI-ProteinID: ACV24828
UniProt: C7P8E6
LinkDB
Position
949879..950859
AA seq 326 aa
MGVQFGDYIPKKIISFEDLKGKKVAIDGMNALYQFLTSIRLKDGSPLRNRKGEITSAYNG
VFYKTIHLLENDITPIWVFDGEPPKLKEKTRKFRKEMKEKAELKMKEAIEKEDFEEAAKY
AKRVSYLTPKIVENCKYLLSLMGIPYVEAPSEGEAQASYMAKKGDVWAVVSQDYDALLYG
APRVVRNLTTTKEMPELIELNEVLEDLRISLDDLIDIAIFIGTDYNPGGVKGIGFKRAYE
LVRSGVAKEVLKKEVENYEEIRRIFKEPKVTDNYSLSLKLPNKEGIIKFLVDENDFNYER
VKKHVDRLYSLIENKTKQKTLDAWFK
NT seq 981 nt   +upstreamnt  +downstreamnt
atgggagtgcaatttggagattacataccaaaaaagattatttcttttgaagatttaaaa
ggaaaaaaagttgctattgatggaatgaatgctttatatcaatttttaacatccataagg
ttaaaggatggttctccactaagaaataggaagggagaaataacctccgcatacaacgga
gttttttataaaacgattcatttgttagagaatgacataacaccaatatgggtttttgac
ggtgagccaccaaagttgaaggaaaaaacaagaaaatttaggaaagaaatgaaagaaaag
gcagaacttaaaatgaaagaagctattgaaaaagaagattttgaagaagctgccaaatat
gcaaagagagttagctacttaactccaaaaatcgtcgaaaattgtaaatatctattaagt
ttgatgggaattccttacgttgaagcgccttcagaaggagaggcacaggcaagctatatg
gcaaagaaaggggatgtttgggctgttgtaagtcaagattacgatgctttgttgtatgga
gctccaagggtcgttagaaatttaacaacaacaaaagaaatgccagaactcattgaactt
aatgaggttttagaagatttaaggatttcattagatgacttaattgacatagctatattt
ataggaactgactataatccaggaggagttaaaggtattgggtttaagagggcttatgaa
ctcgttagaagtggagtagctaaggaagttttgaaaaaggaagttgaaaattatgaagaa
ataaggagaatatttaaagagccaaaagttactgacaactactcactaagcttaaaactt
ccaaataaagagggaatcattaaattcttagttgatgaaaatgattttaactatgaaagg
gttaaaaaacatgtagataggctatatagcttaattgaaaataaaacaaaacaaaaaacc
ttagatgcatggtttaaataa

DBGET integrated database retrieval system