Methanocaldococcus fervens: Mefer_1023
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Entry
Mefer_1023 CDS
T00976
Name
(GenBank) Transcription factor TFIIB cyclin-related
KO
K03124
transcription initiation factor TFIIB
Organism
mfe
Methanocaldococcus fervens
Pathway
mfe03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mfe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Mefer_1023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfe03021
]
Mefer_1023
Transcription machinery [BR:
mfe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Mefer_1023
Prokaryotic type
Archaeal type
TFB
Mefer_1023
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
BRF2-like_C_cyclin_rpt
HTH_AsnC-type
Lar_restr_allev
TMIE
HTH_Tnp_ISL3
Cyclin_C
RPA_interact_C
Zn_ribbon_PaaD
Motif
Other DBs
NCBI-ProteinID:
ACV24841
UniProt:
C7P8F9
LinkDB
All DBs
Position
960614..961609
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AA seq
331 aa
AA seq
DB search
MEALKTKEEKTLKEKKVITKSEKKESSIGEEEIVCPICGSKEVVKDYERAEIVCAKCGCV
IKENLFDIGPEWRAFDHEQKIKRCRVGAPMTYTIHDKGLSTVIDWRNKDSYGKDLSANKR
AQLYRLRKWQRRIRVSDAAERNLAFALSELDRITSKLGLPRHVRENAAIIYRGAVEKGLI
RGRSIEGVVAAAIYAACRRCRVPRTLDEIAEASRVDRKEIGRTYRFLARELGIKLTPTNP
IDYVPRFASELGLPGEVESKAIQILQQAAEKGLTSGRGPTGVAAAAIYIASVLLGCRRTQ
REVAEVAGVTEVTIRNRYKELTEHLDIDVTL
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggaagctctcaaaactaaagaagaaaaaactttaaaagaaaaaaaggttataacaaaa
tctgaaaaaaaagaaagtagtattggggaagaagaaattgtttgtccaatttgtggtagt
aaagaggttgttaaagactatgaaagggctgaaattgtttgtgctaaatgtggatgtgtc
attaaagagaatctatttgacattggtccagaatggagagcatttgaccacgaacaaaag
attaagagatgtagagtcggggcccctatgacctacactattcacgacaaaggattatca
acagtaatcgattggagaaataaagatagttatggaaaagatttatctgcaaataaaaga
gcacaactttataggttaagaaagtggcagagaagaattagagttagtgatgctgcagag
aggaacttagcttttgctttatcagagttggatagaattacatcaaaattaggattacca
aggcacgttagggaaaacgctgctataatttacagaggagctgttgaaaaaggactaata
agaggaagaagtattgaaggtgttgttgctgctgctatttacgctgcttgtagaagatgt
agggtgccaagaacattggatgagattgctgaagcatcaagagtagatagaaaggaaatt
ggaagaacatacagattcttagcaagagagttaggaataaaattaactccaacgaatcct
atcgattacgtgccaagatttgcttctgaacttggattgcctggagaagttgaatctaaa
gctatacagatattacagcaagctgctgaaaaaggattaacgagcggtagaggccctact
ggagtagctgctgcagcgatatacatagcgagtgttctccttggatgtagaagaactcag
agagaagttgctgaagttgcaggagtaacagaggttacaataaggaatagatataaagag
ctaacagaacacttagatatagatgtgaccttgtag
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