Methanocaldococcus fervens: Mefer_1028
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Entry
Mefer_1028 CDS
T00976
Name
(GenBank) Transcription factor TFIIE, alpha subunit
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
mfe
Methanocaldococcus fervens
Pathway
mfe03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mfe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Mefer_1028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfe03021
]
Mefer_1028
Transcription machinery [BR:
mfe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
Mefer_1028
Prokaryotic type
Archaeal type
TFE
Mefer_1028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Zn_Ribbon_TF
Sigma70_r3
HTH_9
HypA
TrmB
Rrf2
Dimerisation
HTH_20
Rad50_zn_hook
DUF2095
Fe_dep_repress
HTH_Cmi2_C
HTH_24
TnsD
HTH_5
GntR
Sigma70_r4_2
HTH_65
HTH_IclR
DZR
zf-LITAF-like
DUF7574
Prefoldin_2
HTH_40
Motif
Other DBs
NCBI-ProteinID:
ACV24846
UniProt:
C7P8G4
LinkDB
All DBs
Position
complement(966263..966829)
Genome browser
AA seq
188 aa
AA seq
DB search
MQSMEKEKKIEMVYEMLNDPLVQEVLFNIFEGDEKGFEVIDVLLEKGETTEEEIAKELNV
KLNVVRKLLYKLYDARLVDYKRWKDEETNWYSYTWLPTLEKLPYVVKKKINELIKDLEEK
LEFEKNNMFFFCPNCNVRFTFEEAMDYGFSCPGCGNMLQEFDNSELIKDLEEQIKFLREE
LKNNPFLK
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
gtgcagagtatggaaaaagaaaagaaaatagagatggtgtatgaaatgctgaacgatccc
ttagttcaagaagtcctattcaatatatttgaaggggatgagaaagggtttgaagttatt
gatgttcttttagagaagggtgagacaacagaggaagaaattgctaaagagctcaatgta
aagctcaatgtagttagaaaattgctttacaagttgtatgatgcaagattggttgattat
aaaagatggaaggatgaagaaaccaattggtattcgtatacttggctaccaacacttgaa
aaactaccgtatgttgtaaagaaaaagataaatgagttaattaaagaccttgaagaaaag
ttggagtttgaaaaaaacaatatgtttttcttctgtccaaattgtaatgtaaggtttacg
tttgaagaggcaatggattatggattttcatgtccaggttgtggaaacatgctacaagaa
tttgataacagtgaattaattaaagatttggaagagcaaataaaatttttaagagaagaa
ttaaaaaacaacccttttttaaaataa
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