Methanocaldococcus fervens: Mefer_1129
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Entry
Mefer_1129 CDS
T00976
Name
(GenBank) MiaB-like tRNA modifying enzyme
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
mfe
Methanocaldococcus fervens
Brite
KEGG Orthology (KO) [BR:
mfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mfe03016
]
Mefer_1129
Enzymes [BR:
mfe01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
Mefer_1129
Transfer RNA biogenesis [BR:
mfe03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
Mefer_1129
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TPR_HPS5_insect
TmcA_N
SPL
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
ACV24939
UniProt:
C7P8Q7
LinkDB
All DBs
Position
complement(1060226..1061482)
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AA seq
418 aa
AA seq
DB search
MIMRVYVEGYGCVLNTADTEIIKNSLKEAGFKLVDNLEEADIVVINTCVVRLETENRMIY
RINELKNLGKEVVVAGCLPKALKNKVKDFLHIYPRESYKAGEILRYYIEKHYRMPYIEEE
INKTLYKKLDYLKPSLITPLPICEGCLGNCSYCIVKIARGKLISYPREKIVNKAKELINK
GVKCLFITAQDTACYGFDIGDNLANLLNDLTQIEGEFIMRVGMMHAKNVEPILDELIEAY
QNEKVGKFLHLPLQSGDDEILKKMNRGYTVDEFKEIVDEFRRKVRNLCFTTDIIVGFPGE
TEEQFQNTLEVLKELKPDYIHGAKYSQRKGTEAAKMKQVDTKIRKRRSEILDKLRRELSY
LNNKKYVGKTMRVLVLDEGKGYTDNFKVVKFEGGEIGEFRKVKITDAKTFGLRGEIEK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgattatgagggtttatgttgaaggatacggatgtgttttaaacactgctgatactgaa
attattaagaactctttaaaagaggcaggatttaaattagttgataatttagaggaggcg
gatattgttgtaataaacacatgcgttgtgagattggaaactgaaaatagaatgatttac
agaataaatgagcttaaaaatttagggaaagaggttgttgttgctggatgcctaccaaaa
gctttaaaaaataaggttaaggattttttgcacatatatccaagggaatcctataaagct
ggagagatattgaggtattatatcgaaaaacattatagaatgccttacattgaagaagag
attaataaaacactttacaaaaaattagattacctaaaaccttctttaatcactccatta
ccaatatgtgagggatgcttaggaaattgcagttattgcattgttaaaatagcaagaggt
aagttaatatcctacccaagggaaaaaattgttaataaagccaaagagttaataaataaa
ggagttaaatgcttatttataactgcccaagacaccgcatgttatggttttgatattgga
gataatttggcaaatttattgaacgatttaacccaaatagagggagagtttataatgaga
gttggaatgatgcatgcaaaaaatgttgaaccaatattggatgagcttatagaagcctat
caaaacgaaaaagttggaaagtttttacatcttcctttacaaagcggagatgatgagatt
ttaaagaaaatgaatagaggttatacagtagatgaatttaaagaaattgttgatgaattt
aggagaaaagttagaaatctctgctttacaacggacataatcgttggatttccaggagaa
actgaggagcagtttcaaaatacattagaggttttaaaagagttaaaaccagattacatt
catggagctaaatattcccaaaggaaaggaacagaagcggcaaagatgaagcaggttgat
acaaaaattaggaaaagaaggagtgagattttagataaattgaggagagagttgagctat
ctaaacaacaaaaaatatgttggaaagaccatgagggttttagttttagatgaaggaaaa
ggttatactgacaactttaaagttgttaaatttgaaggaggggagataggagaatttaga
aaagtaaaaattactgatgccaaaacttttgggttgagaggagaaatagagaaataa
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