Methanocaldococcus fervens: Mefer_1265
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Entry
Mefer_1265 CDS
T00976
Name
(GenBank) DNA-directed RNA polymerase, subunit A''
KO
K03042
DNA-directed RNA polymerase subunit A" [EC:
2.7.7.6
]
Organism
mfe
Methanocaldococcus fervens
Pathway
mfe03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mfe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Mefer_1265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfe03021
]
Mefer_1265
Enzymes [BR:
mfe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Mefer_1265
Transcription machinery [BR:
mfe03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Mefer_1265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
DUF7557
Pcc1
ACR_tran
LsmAD
RNA_pol_Rpb1_7
DUF6955
Motif
Other DBs
NCBI-ProteinID:
ACV25074
UniProt:
C7P942
LinkDB
All DBs
Position
1194491..1195654
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AA seq
387 aa
AA seq
DB search
MDMEVLKEKIEGLDLPQSLKDELFEKLSKEKDLTDEMIEEIINEVVNAYRNAMVEPYEAV
GIVAAQSIGEPGTQMTMRTFHYAGVAEINVTLGLPRMIEIVDARKEPSTPIMTIYLKEGY
KNDKEKAEKIAKEIESLTLENIAESISIDLWTQSIKVELDENRLADRGLTIDDVVEAIKK
KVKVKIDVEGSTLYLKIKTPSIKALRKRIPKIKNIQLKGIPGIERVLVKKEGDEYVLYSQ
GSNLREVFKIEGVDTTRTITNNIIEIQEVLGIEAARNAIINEMRNTLEQQGLEVDIRHLM
LVADMMTADGEVKPIGRHGVAGEKGSVLARAAFEETVKHLYAAAERGDVDKLKGVIENVI
VGKPIYLGTGCVELSIDREYEEGNKEE
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggatatggaagttttaaaagaaaaaattgagggtttggatttaccacaatcattaaag
gatgagttatttgagaaattatcaaaagagaaggatttgacagatgaaatgatagaagag
attattaatgaggttgttaatgcatatagaaatgccatggttgagccgtatgaggcagta
gggatcgttgcagctcaatccattggtgagccaggtacacagatgactatgagaaccttc
cactatgcaggggttgcagagattaacgttaccctaggtttgccaaggatgattgagatt
gtagatgcaagaaaagagccatcaacacctattatgactatctatttaaaagaaggctat
aaaaatgataaagaaaaggctgaaaagatagcaaaagagattgaaagcttaacattggag
aatatagctgagagtataagtattgatttatggactcagtctataaaggttgaattggat
gaaaatagattggctgacaggggattaacaatagatgatgttgttgaggcaattaagaag
aaggtaaaggtaaagattgatgttgaaggaagcacattatatttaaaaataaaaactcca
tcaataaaagcccttagaaagagaattccaaaaattaagaacatacagttaaagggaatt
ccgggaattgagagagttttagttaaaaaggaaggggacgaatacgttctatactcccaa
ggttcaaatttaagggaagtgtttaaaattgaaggtgttgatacaacaagaacaataaca
aacaatatcattgaaattcaggaagttttgggtattgaagcagcaagaaatgcaataata
aacgagatgaggaatacattagaacagcaaggtttggaagttgatataaggcacttgatg
ttggtagcggatatgatgacagctgatggagaggttaagccaataggtaggcatggagtt
gcaggagaaaaaggttctgtcttggcaagagcggcatttgaagagaccgttaaacattta
tatgctgctgcagagagaggagatgttgataagttaaaaggagttatagaaaatgttatt
gttggaaaaccaatataccttggaactggatgtgttgaactatcaatagatagggaatat
gaggagggcaataaagaggagtaa
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