Methanocaldococcus fervens: Mefer_1371
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Entry
Mefer_1371 CDS
T00976
Name
(GenBank) tRNA pseudouridine synthase D TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mfe
Methanocaldococcus fervens
Brite
KEGG Orthology (KO) [BR:
mfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mfe03016
]
Mefer_1371
Enzymes [BR:
mfe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Mefer_1371
Transfer RNA biogenesis [BR:
mfe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Mefer_1371
Prokaryotic type
Mefer_1371
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ACV25178
UniProt:
C7P9E6
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All DBs
Position
complement(1291996..1293288)
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AA seq
430 aa
AA seq
DB search
MYFLIQQRKEESEKNLKEKLKRYRKKLRESRIKEKLKEMPLNMNKYLTDAYTGGIIKKYP
EDFIVEEITPEGIILEVGKSIEFKDEENWKGNFIHFTLEKRNWTTLDAIREIANRVGKQR
KHFGFAGNKDKHAITTQRVGCFNVKLEDLKKVKIKGIVLRDFQKTNRKIRLGDLWGNRFT
IRVREPEIKGKELEEVLNKLCKLKYFLNYYGIQRFGTTRPITHIVGRLIIERDWEGAFHA
YCGTPLPYDDKKSTLARELVDEENFKEAYKKFPKAFFYERRMIKAYIETGSYQKAFMILP
PHLRCMFINAYQSYLFNEIINRRFEYGFEPMEGDILIDGVPSGALFGYKTKFASGIQGEI
EKEIYERENLSPEDFKIGEFGSFIGDRRAMIGKIYNMKYWIEDGSYVLQFCLKKGNYATS
VLREFIEKKK
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtattttttgattcagcagagaaaagaagaaagtgaaaaaaatttaaaggaaaaatta
aaaagatacagaaaaaaattgagagaaagcagaatcaaagaaaaattaaaagaaatgccc
ttaaacatgaataaatacttaacagatgcatacacaggagggattataaaaaaatatcct
gaggattttatagttgaggagataactccagaaggaataattttagaggtgggaaagagc
atagaatttaaagacgaagaaaattggaaaggaaattttatacatttcactttagaaaaa
agaaattggacaaccttagatgctattagggaaatagcaaatagggtaggtaagcagaga
aagcattttggatttgctggaaataaagataaacatgccataacaactcaaagagttggt
tgctttaatgtaaagttggaagacctaaagaaagttaaaattaaaggcattgtattgaga
gattttcaaaaaacaaatagaaaaataagattaggtgatttgtgggggaatagattcacc
ataagggttagagaaccagaaattaaaggaaaagaattagaagaggttttaaacaagtta
tgcaaactgaaatattttttaaattattatggcattcagaggtttggaactacaagaccg
ataacgcatattgtaggaaggcttattatagaaagagattgggaaggagcttttcatgca
tactgtggaactcctcttccctatgatgacaaaaaatcaacgttagcgagggaactcgtt
gatgaagaaaactttaaagaggcatataaaaaattccctaaggctttcttttatgaaagg
aggatgattaaggcatatatagaaactggaagctatcaaaaggcatttatgattctcccc
ccacatttaaggtgtatgtttataaacgcctatcaatcctatctattcaatgagataatt
aatagaaggtttgaatatggctttgaacctatggaaggagatattttaattgatggtgtt
ccaagtggagcgttatttggatataaaacaaaatttgcctctggaatacagggagagatt
gagaaagaaatctatgaaagagaaaatctaagccccgaagatttcaaaattggagaattt
ggttcatttattggagatagaagggcaatgattggaaaaatatacaatatgaaatattgg
attgaagatggtagctatgtattacagttctgcttaaaaaaaggaaactatgcaacatct
gttttaagggaatttatagagaagaaaaaataa
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