Methanobacterium ferruginis: GCM10025860_00270
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Entry
GCM10025860_00270 CDS
T09214
Name
(GenBank) DNA mismatch repair protein MutS
KO
K07456
DNA mismatch repair protein MutS2
Organism
mfeg
Methanobacterium ferruginis
Pathway
mfeg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mfeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GCM10025860_00270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfeg03400
]
GCM10025860_00270
DNA repair and recombination proteins [BR:
mfeg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
GCM10025860_00270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
HHH_5
AAA_14
5_3_exonuc
AAA_28
AAA_22
AAA
AAA_21
nSTAND3
ABC_tran
Mad3_BUB1_II
Ribosomal_S13
T2SSE
AAA_29
AAA_30
FAM25
AAA_18
AAA_23
AAA_16
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
BDZ66579
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Position
20677..22467
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AA seq
596 aa
AA seq
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MDLREIKGIGDKLASKIINHFGSQEEFLRAASNYEVYQLASMDGISQRRAVEIINTVLGN
PTQEFLKTERSVQIYEEIIQSIIQYASTEYSKNRVLLLSPGKNSENIAHNLNIIMEAKEK
VTHLPIEELRTLLKNIDFTKASKPKYDTSKAILVESREDYTSLMDRGLNQHAQILSINEV
GSLDEFELVIYVYREGILEVNNTSNLTMVNGEAEDLEIVPEIILSYYQENHDLLVNILKI
RNILGYESVLGDVLELLDSIGSSRVDEKLFDDAVNQAKEKADKQLEDAIKNVDLSGEEVL
DLLNRDMPPKIQEIFDRILKEIIRDIKEDTGVSFDPFIQKYPLEIDWQELERVKKQEIGK
KQVKSFEERVIVAAKLENLKKDVESEIQEILEFDYQFTLGCFAHYYDLHPPHLGDVFSFK
EGLHLNLALEDPEHVQRIDYSLESPDNVVLLTGANSGGKTTLLETLAQMSIMSQMGLPVC
AREAQVKLVDEVYFFSKKRSLDAGAFESFLSTFMPIVVREEDKLILLDELEAITELEAAV
KIISSFINFIQDSESFAVIVTHMAQEILKNTDVRVDGIEAKGLDEEYNLMVDRTPG
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
ttggatctgcgtgaaattaagggcataggagataagttagcctccaagatcataaaccat
ttcggaagtcaggaagaattcctgcgtgctgcaagtaattatgaagtttatcaactggca
agtatggatgggatcagccagcgccgtgcagtggaaatcattaatacagttctgggtaat
cccactcaagaattcctgaaaacagaacgttccgtgcagatctatgaggaaataattcaa
agtataatacaatatgctagtacagaatattctaaaaacagggttcttcttctcagtcct
ggtaaaaactcagagaatattgcccataatttgaatataattatggaagccaaggaaaaa
gtgacccaccttcccatagaggaacttagaactcttttgaaaaatatagattttaccaaa
gcttctaaacccaaatatgacacttctaaagctattttagttgaatccagagaggattat
accagtttaatggataggggtcttaatcagcatgcccaaattctcagtattaatgaagtg
ggaagtctggatgaatttgaactggtaatttacgtgtatagagagggtattcttgaggtg
aataacacatcgaaccttaccatggtgaatggtgaagctgaagaccttgaaatcgttcca
gaaattattttatcttactatcaggaaaaccatgatcttttagtgaatattttgaagatt
agaaatatactgggatatgaatctgttttaggagatgttttagaattattagattctatt
ggatcttccagggtggatgaaaagttatttgatgatgctgtgaatcaggccaaagaaaaa
gcggataaacaattagaggatgctattaaaaatgtggatctgtctggtgaagaggtttta
gatcttttaaatagggatatgccacctaagatccaggaaatctttgaccgaattctgaaa
gagatcattagggatattaaagaggatacgggagttagtttcgatccatttattcagaag
tatcccttggaaatagattggcaggaattggaaagagttaaaaaacaggaaattggtaaa
aaacaggttaaatcctttgaagaaagagttattgtggctgcaaaactcgagaatcttaag
aaggatgttgaatctgaaattcaggaaatacttgaatttgattatcagttcactctgggc
tgttttgcccattattatgatctgcatccaccccatcttggtgatgttttcagctttaaa
gaaggtttacatttgaatttagcccttgaagacccagaacatgtgcaacggattgattat
tccttggaatctccggataatgtggttctccttactggggctaatagtggaggtaaaacc
accctcctggagaccctggcccagatgagtatcatgagtcagatggggttgccagtatgt
gccagggaagcccaggtgaaactggttgatgaggtttatttcttcagcaaaaaacgttca
cttgatgcaggagcttttgaatccttcttaagcacattcatgcccattgttgtgcgtgaa
gaggataaattaattcttttagatgaattggaggccattactgaattggaagctgcggtt
aagatcatctccagtttcataaatttcatacaggattctgaatcatttgcagttattgta
acccatatggcccaggagatactgaaaaacacggatgtacgggtggatggtattgaagcc
aagggcctggatgaggagtataacctgatggtggatcgtacccccggatga
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