KEGG   Methanobacterium ferruginis: GCM10025860_05760
Entry
GCM10025860_05760 CDS       T09214                                 
Name
(GenBank) DNA polymerase III sliding clamp
  KO
K04802  proliferating cell nuclear antigen
Organism
mfeg  Methanobacterium ferruginis
Pathway
mfeg03030  DNA replication
mfeg03410  Base excision repair
mfeg03420  Nucleotide excision repair
mfeg03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mfeg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GCM10025860_05760
   03410 Base excision repair
    GCM10025860_05760
   03420 Nucleotide excision repair
    GCM10025860_05760
   03430 Mismatch repair
    GCM10025860_05760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mfeg03032]
    GCM10025860_05760
   03400 DNA repair and recombination proteins [BR:mfeg03400]
    GCM10025860_05760
DNA replication proteins [BR:mfeg03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    GCM10025860_05760
DNA repair and recombination proteins [BR:mfeg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     GCM10025860_05760
   MMR (mismatch excision repair)
    Other MMR factors
     GCM10025860_05760
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    GCM10025860_05760
SSDB
Motif
Pfam: PCNA_N Rad9 PCNA_C Rad1 Hus1 Ribosomal_L25p DNA_pol3_beta NapD
Other DBs
NCBI-ProteinID: BDZ67128
LinkDB
Position
complement(542722..543456)
AA seq 244 aa
MFKAVLSDSNILKTSFDAISSIVDEVQMQADEEGLRLDALDRSHITFVHLELKKGLFDEY
QCEESMKINVDTEELMKVLKRAKAEDMVELTVDEGNLIITLEGEARRTFKIRLIDIEYEA
PSPPQLEYPTEFEVPFALLKDSIQDIGIVSDKIALQVNEDKFEASAEGEFGDAQIEYLHG
EKIEESAKSIFSLEKVKEMLKADKFSESAVIRLGNDMPLNLALKMASDDGVLSFLLAPRI
ESEE
NT seq 735 nt   +upstreamnt  +downstreamnt
atgttcaaggcagttttaagtgattccaatattttgaagaccagttttgatgccatatca
tctattgtagatgaagtacagatgcaggccgatgaagagggcctgagattggacgccctg
gaccgcagtcacattacattcgtgcacctggaacttaagaaaggattattcgatgaatac
cagtgcgaagagtcaatgaagatcaatgtggacactgaggaattgatgaaagttttaaaa
agggctaaagcagaagacatggtggaactcactgtggatgaaggcaatttaatcataaca
ctcgagggagaagctcgcagaacattcaaaatacgccttatagacatagaatatgaggct
cctagcccaccacagctagaatatcccacagaatttgaggttccatttgccctacttaaa
gactccattcaggacataggcatagtatctgacaagatagctctccaagtgaatgaagat
aaattcgaagcttcagcagaaggtgaatttggagatgctcaaatagagtacctgcacgga
gaaaagatagaagaatctgcaaaatccatattttccctggaaaaagttaaagaaatgctc
aaagctgataaattctcagaatctgcagtgatcaggctaggaaatgacatgcctctgaat
cttgctctgaaaatggcttcagatgatggtgtgttgagtttcttactagctcctaggata
gaaagtgaggaataa

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