KEGG   Methanobacterium ferruginis: GCM10025860_06130
Entry
GCM10025860_06130 CDS       T09214                                 
Name
(GenBank) hypothetical protein
  KO
K07466  replication factor A1
Organism
mfeg  Methanobacterium ferruginis
Pathway
mfeg03030  DNA replication
mfeg03420  Nucleotide excision repair
mfeg03430  Mismatch repair
mfeg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mfeg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GCM10025860_06130
   03420 Nucleotide excision repair
    GCM10025860_06130
   03430 Mismatch repair
    GCM10025860_06130
   03440 Homologous recombination
    GCM10025860_06130
   03460 Fanconi anemia pathway
    GCM10025860_06130
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mfeg03000]
    GCM10025860_06130
   03032 DNA replication proteins [BR:mfeg03032]
    GCM10025860_06130
   03400 DNA repair and recombination proteins [BR:mfeg03400]
    GCM10025860_06130
Transcription factors [BR:mfeg03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    GCM10025860_06130
DNA replication proteins [BR:mfeg03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    GCM10025860_06130
DNA repair and recombination proteins [BR:mfeg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     GCM10025860_06130
   MMR (mismatch excision repair)
     GCM10025860_06130
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     GCM10025860_06130
SSDB
Motif
Pfam: Rep_fac-A_C tRNA_anti-codon REPA_OB_2 CDC24_OB3 Ssb-like_OB MlaD Zn_ribbon_6 DZR_2 Prok-RING_1 DZR Zn_Ribbon_YjdM
Other DBs
NCBI-ProteinID: BDZ67165
LinkDB
Position
574088..575551
AA seq 487 aa
MGLVSKVYDTITFERDDGSTGKVKSLELEDDTGTIRVTLWNEDTEMEIKKGDILKIIGGN
IEFDDYSGTNYRANTNWNSKLIVNPPIDQKMEEVLSEVGKYIKPVKITDLSNIEDDGEEV
DIIGRVVNLYEPNEFQRDDGTTGLVRTAEIADETGMVRVSMWDSKAEYPMKEGDALKIEN
ARSRLGEYQVDLSVGKTSRILKPTEDEISNLPSLQDVESMLYQTKKIEELAEGDRDVSII
GRILSTSEPNQFTKSDGSTGIVRSIEIADDTGVVRASLWDDQANAPLKEGEAIKIENPRV
NLRNDHIEISVGRTTLITKAKEDETSIPTLDEIQDKIYPPKKIEDIEEGDQNIKVSGEVI
DIRGNKILFEMCPNCNKRVNWVDDAYICDICGEEIEKPNMLMIIGLMMEDDTGTISMTFF
RQSAEEVLGMTTPEAEEIIAATGDEGSLEEKVGDLVGRQITVIADASFDEYNEEIRLNAK
KLVDVKL
NT seq 1464 nt   +upstreamnt  +downstreamnt
gtgggtctggtgagtaaagtttatgacaccatcacctttgaaagagatgatggtagcacc
ggaaaagttaaatccttggagttagaggatgacactggaactatccgggtgaccctgtgg
aatgaagataccgaaatggagataaagaaaggagatatcctgaaaatcatagggggcaac
attgaatttgacgattactcaggcaccaattaccgggcgaacactaactggaacagtaaa
ctcatcgtaaatccacctatagaccagaaaatggaggaagtcctgagtgaagtgggtaaa
tacataaaaccagttaaaatcactgatttaagcaacattgaagatgatggggaagaagtt
gacattattggacgtgtagttaatctctacgaacctaacgaattccagagagatgatgga
accaccggcctggttaggaccgcagaaatagcagacgaaaccggcatggtacgagtttcc
atgtgggacagtaaagcagaatatcccatgaaagaaggagatgccctgaaaattgagaat
gctcgcagccgcctgggcgaatatcaggtggatctaagtgtgggtaaaacttccaggata
ttgaaacctacagaagatgagatctccaatttaccctccctgcaagatgtggaatccatg
ctctatcagactaaaaagattgaagaattggctgaaggagaccgggatgtgagcatcatt
ggccgaattttaagtacgagtgaacccaatcagttcaccaaaagcgatggcagcacaggt
attgtccgttcaatagaaatagctgatgacacaggagtggtaagagcttcactctgggat
gaccaggccaatgccccccttaaagaaggagaagctattaaaattgagaacccacgggtt
aatttaagaaatgaccatatagagatcagtgtaggtagaacaaccctcataaccaaagcc
aaagaagatgaaacatccattccaactttagatgagattcaagataaaatatatccccct
aagaaaattgaagatattgaagagggagaccagaacattaaggtgtctggagaggttatt
gatatccgaggtaataagatactctttgaaatgtgtcctaactgtaacaaaagggttaac
tgggtggatgatgcttacatatgtgatatttgtggtgaagaaattgaaaaacccaacatg
ctgatgatcattggactcatgatggaagatgacactggaaccataagtatgacattcttc
cgccaatcagctgaagaagttctgggaatgactacacctgaagcagaggaaatcatagct
gccactggagatgaaggatccctggaagaaaaagtgggtgatctggtaggtagacagatt
accgtgatcgctgatgccagcttcgacgaatacaacgaggaaatacgtttaaacgccaag
aaactagtggacgttaaactttaa

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