Methanobacterium ferruginis: GCM10025860_08640
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Entry
GCM10025860_08640 CDS
T09214
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mfeg
Methanobacterium ferruginis
Brite
KEGG Orthology (KO) [BR:
mfeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mfeg03016
]
GCM10025860_08640
Enzymes [BR:
mfeg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
GCM10025860_08640
Transfer RNA biogenesis [BR:
mfeg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GCM10025860_08640
Prokaryotic type
GCM10025860_08640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
BDZ67416
LinkDB
All DBs
Position
819344..820597
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AA seq
417 aa
AA seq
DB search
MLNAETYLTPQKGIGGQIRTINEDFYVEEIPETQPKGEGPNTWLWIEKEGRNTLDVVLDI
AREMKMNRKQMGFAGMKDKAAVTRQWICVSNKTPEELQGLEDKLHHVKILDIVPHQKKLR
IGQLVGNKFRLQVRDVEDPDSAAQRAEEILEQLKERGVPNYYGFQRFGKNRPNTHLVGKA
LIKEGVKAAVDRYIGHPYDTEPQHIQEARKFYDEGELEESLDSMPSGMRYEKMMIRTLLK
EKKKKGELDEKSYIRALKSLPKPLSRMFVHAYQSYLFNRAVSERIKLGIDQYVEGDILID
NEEHLIHEFDPETINQEIKDFQAHPSAPLFGSKVPLAGGKLGIMEQEILDEEHLKLEDFV
VPLMPKLGSHGIRRAVRFKIWDVSAEATEEGVLLGFSIPKGSYATSVLREVMKKDVY
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatgcagaaacatatctcacccctcagaaaggaattgggggacaaatcagaacc
ataaatgaagatttctatgtagaagaaatcccagaaacccagcctaaaggtgaaggacca
aacacctggctttggatcgagaaagaaggtcgaaacacactagatgtggttttagacatt
gctcgagaaatgaagatgaaccggaaacagatgggatttgctgggatgaaagataaagca
gcagtaacccgtcaatggatatgtgtcagtaacaaaaccccagaagagttacagggattg
gaagataaacttcatcatgttaaaatattggacattgttccccatcagaaaaaactacgc
ataggccaactggtgggaaataaattccgtttacaagtaagggatgtggaagatcctgat
tcagcagcacaaagggcagaagaaatccttgaacagttaaaagaaaggggagtgcctaat
tattatggttttcagcgttttggtaagaaccggcccaacacccacctggtgggcaaagcc
ctgattaaagagggagtgaaagcagcagtggaccgttacataggtcatccttacgatact
gagccacaacatatccaggaagcccgtaaattctatgatgaaggagaactggaagaatca
ttggattctatgcccagtggtatgcgctatgagaagatgatgatccgtaccctcctaaaa
gaaaagaaaaagaaaggggaactggatgaaaaatcatatatccgggcacttaaaagtctg
cccaaacccttaagcaggatgtttgtccatgcttaccaatcctacctctttaaccgggca
gtaagtgaacgcatcaaactgggaatagaccagtatgtggagggtgatattttaattgac
aatgaagagcaccttatccatgaatttgacccggaaacaataaatcaagagataaaggac
ttccaggcacatccttctgctcctctatttgggagtaaggtgcctctggctggtggaaaa
ctgggtataatggagcaagaaatactggatgaagaacacctaaaactagaagatttcgtg
gtaccattaatgcctaaactgggaagtcatggcatacgccgggctgtccgcttcaaaata
tgggatgtatctgcagaggcaacagaagaaggggttctattaggtttttcaatccccaag
ggctcttatgctaccagtgttctgagggaagtaatgaaaaaagatgtttattaa
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