Methanobacterium ferruginis: GCM10025860_10020
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Entry
GCM10025860_10020 CDS
T09214
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
mfeg
Methanobacterium ferruginis
Pathway
mfeg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mfeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GCM10025860_10020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfeg03400
]
GCM10025860_10020
Enzymes [BR:
mfeg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
GCM10025860_10020
DNA repair and recombination proteins [BR:
mfeg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
GCM10025860_10020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
UvdE
Motif
Other DBs
NCBI-ProteinID:
BDZ67554
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All DBs
Position
955597..956448
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AA seq
283 aa
AA seq
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MKTKIKFGPAGNPIGFNGQTVNVCDYIHNIGLEAYEYQATYGVRIQKQSALKLGENALKN
KIRVSIHAPYYVNFSAQKDDVLERSVQRLVQSARVAEWMGAYRIVFHPGFYTKYTPAQAL
DRCKRAITMLMEDLDSFGVKNFTFAPETTGKRSQLGSLDEIIEICQSFDHFAPTIDFAHI
HARGRGCIKGADDYHQILDKLEDGLGEIGHGKEILHCHFTRIEYSDAGERKHHVLMEKEY
GPPLEPLLEALLDCGWDTTIICETPFLEKDALLMQQKYQNLFR
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactaagattaaattcggccctgcaggtaatcccataggttttaatggtcaaact
gttaatgtctgtgattatatccacaatataggattagaagcttatgagtaccaggccacc
tatggagtacgcatccagaaacaatccgctcttaaactaggtgaaaatgctctgaaaaat
aaaattcgagtttcaatacacgccccctattatgttaacttttctgcccagaaagatgat
gttcttgagcgttctgtacagagactggttcaatctgcccgggtagctgagtggatggga
gcatatcgcatagttttccatcctggattttacactaaatacacacctgcacaggcactt
gatcggtgcaagagagctattactatgcttatggaagatttagattcttttggagttaaa
aatttcaccttcgcaccagaaactactggaaaacggtcacagctaggtagtttagatgag
atcatagaaatctgccaatcatttgaccacttcgctcccacaattgacttcgcccacatt
catgccaggggaagaggatgtattaaaggtgcagatgattatcaccaaattttagataaa
ttagaggatgggcttggtgaaattgggcatggcaaagaaattctgcactgtcattttacc
cggattgaatattctgatgctggtgaaaggaaacatcatgtattgatggaaaaagagtat
ggtcctcccttagaaccattactggaagcactgttagattgtggttgggatactaccata
atttgtgaaactcctttcctggagaaagacgctcttttaatgcaacagaaataccagaat
ctttttagatag
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