Methanobacterium ferruginis: GCM10025860_10490
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Entry
GCM10025860_10490 CDS
T09214
Name
(GenBank) DNA-directed RNA polymerase subunit B'
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
mfeg
Methanobacterium ferruginis
Pathway
mfeg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mfeg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GCM10025860_10490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfeg03021
]
GCM10025860_10490
Enzymes [BR:
mfeg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GCM10025860_10490
Transcription machinery [BR:
mfeg03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
GCM10025860_10490
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Zf_2nd_IFT121
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
BDZ67601
LinkDB
All DBs
Position
998507..1000318
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AA seq
603 aa
AA seq
DB search
MKKCKIYTNGKLIGTCDDPEGFVEEMRQKRRSGEVSYEMNITHYPENNEIYLFNDPGRTR
RPLIVVENGGSLLTDEHMQKVADGEMVWQDLINEGIIEYLDAEEEENTYIAMFADELNEY
HTHMEIDPATMLGICAGIIPYANHNSSPRNTMEAGMTKQALGLYVSNYNLRTDTRAHLLH
QPQVPIVKTRSMDATHYDKRPSGQNFVVAVMSYEGYNMEDALILNKASLERGLARSSFFR
SYEASERRYPGGQEDKFEVPENMVRGYRSEEVYRNLDEDGIVNPEVNVKSGDVLIGKTSP
PRFLEEIDEFGTVAERRRETSVTVRHGEHGVVDAVMLTETVEGSKLAKIRVRDQRQPEFG
DKFASRHGQKGVVGLIVSQENMPFTAEGVVPDLIVNPHAIPSRMSVGQVLEMLAGKAGCM
EGHRMDGTPFSGTHEHEVMDLLRTNGFETAGRESLHNGITGERIEAEIFIGVAYYQKLHH
MTSDKVYARSRGPVQVLTRQPTEGRAREGGLRFGEMERDCLIAHGAALALKERLLDESDK
YEAIICGECGMVAIYDRIRDKKYCPICGDSESYPVEISYAFKLLLDELKSLCIFPKLVLE
DKA
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaatgcaaaatttatactaacgggaagcttattgggacttgtgatgatccagaa
ggtttcgtggaggaaatgcgccagaaaaggagatctggagaagtttcctatgaaatgaac
atcacccactatccagaaaacaatgaaatatacctatttaacgacccaggaagaacccgc
agaccactaattgtagtggaaaacggaggatcactcttaacagatgaacatatgcaaaaa
gtggctgatggagaaatggtctggcaagacctgatcaatgagggaatcattgaatacctg
gatgccgaggaagaagaaaacacttacatagccatgttcgctgatgaactaaatgaatat
catacccacatggaaatagacccagccactatgctgggaatatgtgccgggatcataccc
tatgccaaccacaactcatccccccgtaacactatggaagcagggatgaccaaacaggcg
ctgggactttacgtttcaaactataacttaagaacagacacccgtgcacacctcctgcac
caaccacaagtccccattgttaaaaccagaagtatggatgccactcactatgataagaga
ccatccggtcagaactttgtagtggcagtaatgtcctatgaaggttacaacatggaagac
gccctcatacttaacaaagcctccctagaacgtggactggctcgatcatcatttttcaga
tcctacgaggcctccgaacgccgatatccaggaggacaagaggacaaatttgaagtacca
gaaaacatggtacgaggataccgctcagaagaagtgtaccgtaacctggatgaagatgga
atcgtcaacccagaagttaacgtgaaatcaggagatgtgctcataggaaaaacatcacca
ccccggttcttggaagaaatcgacgaattcggaacagtggccgaacgaagaagagaaacc
tcagtcacggtacgacacggagaacacggagtggtagatgcagtcatgctaaccgaaaca
gttgaaggaagtaaactggctaaaataagagtaagagaccaacgacaaccagaattcggg
gataaattcgcatcaaggcacggacaaaaaggagttgtcggccttatagtttctcaggag
aacatgcccttcactgctgaaggagtggtccctgatctaatagtcaacccccacgcaatc
ccttccaggatgtcagttggacaggtgctggagatgctggcaggtaaagccggatgcatg
gaaggacaccgtatggatggaacaccattcagtggaacacatgaacacgaagtaatggat
cttttacgaaccaatggttttgaaactgctggccgggaatcactgcacaatggaatcacc
ggtgaaagaatcgaagccgaaatatttattggagtggcttactaccagaaactacaccac
atgacctcagataaagtttacgcccggtcaaggggaccggtacaggtattaaccagacaa
cccaccgagggaagagcccgagaaggaggtctccgattcggagaaatggaaagagactgt
ctcatagcccatggagcggcacttgcccttaaagagagattattggatgaatccgataaa
tatgaagctataatctgtggtgagtgtggaatggtagccatatatgaccgaataagagat
aaaaaatactgccctatctgtggagactcagaaagttaccctgtagaaatatcatacgca
ttcaagctattattagacgagctcaagagtctgtgtatcttccccaaactggttcttgaa
gataaagcctga
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