Methanobacterium ferruginis: GCM10025860_10500
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Entry
GCM10025860_10500 CDS
T09214
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
mfeg
Methanobacterium ferruginis
Pathway
mfeg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mfeg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GCM10025860_10500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfeg03021
]
GCM10025860_10500
Enzymes [BR:
mfeg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GCM10025860_10500
Transcription machinery [BR:
mfeg03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
GCM10025860_10500
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
AtMg01350
USP7_ICP0_bdg
PDH_E1_N
Motif
Other DBs
NCBI-ProteinID:
BDZ67602
LinkDB
All DBs
Position
1000376..1002991
Genome browser
AA seq
871 aa
AA seq
DB search
MKGILKKIAQINFGLLSPENIRRMSVTKIVTPDTYDEDGYPIEAGLMDPRLGVIDPGLRC
RSCGSKGGDCQGHFGHINLARPVVHVGFADTIHKILRSTCSECGKVLLTDTEKVDYQNRI
ESRLQNEESITSLVKDVYNTARRDKCPHCDTEQEDVKIDKPVSIVEGNYKLTPSEVRERL
EQIPEEDYIFLGINSKVARPEWMVLTVLPVPPVTVRPSITLETGERSEDDLTHKLVDILR
INQRLKENMEAGAPQLIVEDLWELLQYHVTTYFDNEASGVPPARHRSGRPLKTLAQRLKG
KEGRFRSNLSGKRVNFSARTVISPDPNISINEVGVPEMIATEVTVPIYVTEWNMEDMKKY
ILNGPKQHPGANYVIRPDARKIRVYDETKEAIIEKLEPGFVVERHLMDGDIVLFNRQPSL
HRMSMMAHEVKVLPYKTFRLNLCVCPPYNADFDGDEMNMHVFQTEESRAEAKSLMRVQEH
ILSPRFGGPIIGGIHDHISGAYLLTREGSNFSEEDVFQMLKKSQLPIPKPRNKEWTGKEV
FSLLLPKNLNMVYKAEICRKCDECLREDCKNDAYVVIENGELRSGAIDEKAFGAFSGKIL
DSVVKEYGTERAREFLDSATKLSISGIMKRGFTTSTADEEIPQEAKDRIEELLRKAEEKV
EMLIEAYRDDELEALPGRSLRETLEMKIMQVLGEARDKSGEIAESYFGMDNHAVIMALTG
ARGSMLNLTQIAACVGQQSVRGGRIERGYSKRTLPHFQEGELGAKASGFVHSSYKAGLDP
LEFFFHAMGGREGLVDTAIRTAQSGYMQRRLVNALQDLSVNTDRTVRDNRGVVIQTHYGE
DGIDPAKSDYGKVADIDRLIEEMRIKAKAGK
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaggaattttaaagaagatcgcccagatcaactttggcctgctatcaccggaaaac
atccggagaatgtccgtcaccaaaatcgtgacccccgatacctacgatgaagatggatac
cccatagaagcgggtctcatggacccccgactgggagtcatcgacccaggactcagatgt
cggtcctgtggttctaaaggaggagactgccagggacactttggccatataaacctggcc
agaccagtagttcatgtgggattcgcagataccatacacaaaatattacgttctacctgc
agtgaatgtggaaaagtcctgttaactgacacagaaaaggttgactaccagaacagaatc
gaatcccgcttacaaaatgaggaaagcatcacttcactggttaaagacgtttacaacacc
gcacgcagagataaatgcccccactgtgacaccgaacaggaagatgttaaaattgacaaa
ccagtatccattgttgagggaaactacaaattaacccccagcgaagtcagggaacgcttg
gaacaaatccctgaagaagactacatattcctgggaatcaactccaaagtagcccgacca
gaatggatggtgctaactgtactacctgtaccaccggtgacagtaagaccttccataacc
ctggaaaccggtgaaagatccgaggatgacctcacccacaaactggtggacatcctacgt
atcaatcagcgcttaaaggaaaacatggaagcaggagcaccacaactcattgtggaggat
ctctgggaattattacaataccacgttaccacttactttgataatgaagcatcaggagtg
cctccagcaaggcaccgctcaggaaggccccttaaaaccctggcacaacgtttgaaaggt
aaagaaggacgtttcagaagtaacctctccggtaaaagggtgaacttctcagccaggaca
gttatatctccagaccccaacatcagtatcaatgaagtaggggtgccagagatgatagcc
accgaggtcacagtacccatctatgtcactgaatggaacatggaagacatgaagaaatac
atactcaacggccctaaacagcatcctggagctaattatgttataagacctgatgcccgg
aagataagagtctatgatgagaccaaagaagctatcatcgagaaactagaacccggattc
gtggtggaaagacatctcatggacggagatatagtactcttcaaccgacaaccatccctg
cacagaatgtccatgatggcccacgaagtgaaagtactaccctacaagacattccggttg
aatctatgtgtatgtccaccatacaacgctgactttgacggggacgaaatgaacatgcac
gtcttccaaactgaagaatcacgtgccgaggccaaatccctcatgagagtacaggaacac
atcctatcacctcgtttcggtggaccaattattggaggaatacacgatcatatctctgga
gcatacctcctcacaagggaaggatcaaacttctcagaagaagatgtgtttcagatgctt
aaaaaatcacagttacccatccccaaacctagaaacaaggaatggactggtaaagaggta
ttcagtctgttactaccaaaaaacctgaacatggtttacaaagcagaaatctgtcgtaaa
tgtgatgaatgtctacgtgaagactgcaaaaacgatgcttacgtagtaatagaaaatgga
gaactcagatccggtgccatagacgaaaaagcattcggagcattctccggtaaaattttg
gattctgttgtcaaagaatatggaactgaacgggccagagaattcctggactcagccacc
aaactgtccatatcaggtattatgaaacgtggattcaccaccagtactgcggatgaggaa
ataccccaggaagctaaagaccgtatagaagaactcctgaggaaggctgaagaaaaagta
gaaatgctcattgaagcctaccgtgatgatgaactggaagccttacctggccgcagtctc
agggaaaccctggaaatgaagatcatgcaggttttaggtgaagccagagacaaatcaggg
gaaatagcagaaagctactttggaatggataaccatgcagttatcatggcattaaccggt
gctcgtggatccatgctgaacttaacccagatcgccgcctgtgtgggacagcaatctgtt
cgtggtggtcgtattgaaaggggttacagtaaacgaaccttacctcacttccaagaaggt
gaactgggtgctaaagccagcggattcgttcactcaagttacaaggccggactggaccca
ctagaattcttcttccacgccatgggaggacgtgaaggactggtggatactgctatccgt
acagcccagagtggttacatgcaacgccgactggtaaacgcattacaggatctttcagtc
aacacggatagaacagtccgtgacaaccgaggagtggttatacaaacccattatggtgaa
gacggaatagaccctgccaaaagtgactacggaaaagtagctgacattgacagattaata
gaagagatgcgtattaaagccaaggcaggcaaataa
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