Methanobacterium ferruginis: GCM10025860_11420
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Entry
GCM10025860_11420 CDS
T09214
Name
(GenBank) ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mfeg
Methanobacterium ferruginis
Pathway
mfeg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mfeg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
GCM10025860_11420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfeg03019
]
GCM10025860_11420
03009 Ribosome biogenesis [BR:
mfeg03009
]
GCM10025860_11420
04131 Membrane trafficking [BR:
mfeg04131
]
GCM10025860_11420
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mfeg04147
]
GCM10025860_11420
Messenger RNA biogenesis [BR:
mfeg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
GCM10025860_11420
Ribosome biogenesis [BR:
mfeg03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
GCM10025860_11420
Membrane trafficking [BR:
mfeg04131
]
SNARE
SNARE associated proteins
Others
GCM10025860_11420
Autophagy
Aggrephagy
Other aggrephagy associated proteins
GCM10025860_11420
Exosome [BR:
mfeg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
GCM10025860_11420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_2
AAA_16
RuvB_N
CDC48_2
AAA_22
TIP49
AAA_14
AAA_5
AAA_33
nSTAND3
AAA_28
RNA_helicase
AAA_3
Sigma54_activat
Mg_chelatase
NPHP3_N
AAA_7
AAA_24
IstB_IS21
Zeta_toxin
Parvo_NS1
PhoH
SLFN-g3_helicase
AAA_18
ATPase
NB-ARC
ABC_tran
AAA_11
AAA_17
ATPase_2
AAA_lid_PRS2_C
DUF815
Bac_DnaA
Viral_helicase1
AAA_19
Vps4_C
Motif
Other DBs
NCBI-ProteinID:
BDZ67694
LinkDB
All DBs
Position
1087353..1089536
Genome browser
AA seq
727 aa
AA seq
DB search
MKLKVAEAFSQADVGRSIARIDPACMEKLDLLDGDMIEIEGRKLTTTTVASSQSDIGLGI
IRIDGYIRKNAGTSLGEEVTVRKAQVKEAQKVVLAPVDQKIMIRGDVKGAFQNRVLSKGD
IIVTGIRQQQQTAMRGSLFDEFFREAMTDVSPMGELKLAVVSTKPAGAVKITEMTEVEVQ
TDPVDVSKLEGVKTLVDVTYEDIGGLKEEVKKVREMIEIPLKRPELFERLGISPPKGVLM
HGPPGTGKTLLAKAVANESDAHFIAIQGPEIMSKYVGGSEERLREFFEEAEENAPSIVFI
DEIDAIAPKREEVSGETERRVVAQLLTLMDGLKTRGQVVVIGATNRPDALDAALRRPGRF
DREIEIGVPDKDGRQEVLEIHTRGMPLDEKVDLDEIADTTHGFVGADLEMLCKEAAMRVL
RRVLPDIKADEEIPKETLKKMIIKKSDFKEALKEIQPSALREVLVQVPDIKWEDIGGLEN
AKQELREAVEWPLKYPESFEKFGVTPPKGVLVYGPPGTGKTLLAKAVANESKSNFIAVKG
PELLSKWVGESEKGVREIFRKARQTAPTVIFFDEIDSIASARSGSTTDSGVTQRVVNQLL
TEIDGLEELQDVAVIAATNRVDIMDPALLRPGRFDRHVKVDDPDEKARLEIFKVHTKDMP
LAEDVDLEYLAKNTEKYVGADIEAVCREAVMLTLRDNLKADDVKMKYFKKAMKKVKTEEK
VDMVQYH
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaaaagtagcagaagcattttcacaggcagacgttggtagatccatagccaga
atagacccagcatgcatggaaaagctggatcttctggatggagatatgatagaaattgaa
ggtagaaaactcaccaccaccactgtagcctcatcccaatctgacataggattaggcatt
ataagaattgatggatacatcagaaaaaatgcaggaacatctctgggagaagaagtaact
gtcagaaaagcccaggttaaggaagcacagaaagtggtgttggctccagtagaccagaag
atcatgattagaggtgatgtgaaaggtgccttccaaaatagagtactatccaaaggagat
attatagtaactggaattaggcaacagcagcaaaccgctatgagaggaagtttattcgat
gaattcttccgagaagccatgacggatgtcagtcctatgggagaactgaaactggcagtg
gtatccacaaaaccagctggagccgtgaaaatcacggaaatgaccgaagtagaagttcaa
actgatcccgtagatgtatctaaactggaaggcgtgaaaaccctggtagatgtcacttat
gaagacataggcggtcttaaagaggaagttaaaaaagtcagagaaatgattgaaattcct
ctgaaacgaccggaactctttgaaagactgggaatatcaccacccaaaggagttctaatg
cacggaccacctggaactggtaaaaccctcctggctaaagcagtggccaacgaaagtgat
gcccatttcattgccatacaaggcccagaaatcatgagtaaatatgtgggtggatcagag
gaaagactaagggaattcttcgaagaagcagaagaaaacgccccatcaatagtattcata
gatgaaatagatgctatagctcctaaaagagaggaagtatctggagaaactgaaagacgt
gtggtagcacagcttctgacacttatggatggtcttaaaaccagaggccaagtggtagtt
atcggtgccaccaaccgacccgatgcactggacgcagcactccgtcgtcccggaagattt
gaccgggaaatagaaattggagtaccagacaaggacggacgccaggaagtacttgaaatc
cacaccaggggaatgcctctggatgaaaaagtagacctggatgaaattgcagataccacc
catggttttgtaggagcagatctggaaatgctctgtaaagaagcagccatgagggtcttg
agaagggtattaccggacatcaaggcggatgaagaaatacctaaagaaaccttgaaaaaa
atgatcatcaagaagtccgactttaaagaagctttaaaggaaatccagccatctgccctc
cgtgaagtactggtacaggtccctgatattaaatgggaagacataggtggcttggaaaac
gctaaacaagaactccgagaagcagtggaatggcctctcaagtaccctgagagttttgaa
aaattcggagtcacaccacctaaaggtgtcctagtatatggaccaccaggtactggtaaa
acactcctagctaaagcagtggccaacgaaagtaaatccaacttcatcgctgtcaaagga
cccgaactactatctaaatgggtgggtgaatcagaaaaaggtgtgagggaaattttccgc
aaagccagacagacagcccccacagtaatattctttgatgaaatagacagcatagcttca
gcccgatccggcagtaccactgacagtggagtcacccagagagtggttaaccagcttttg
acggaaatcgacggattagaggaactacaggacgtggcggtaattgcagccaccaaccga
gtggacatcatggacccggccctacttagacccggcagatttgaccgacatgtgaaggtt
gatgacccagatgaaaaagcacggctggaaatattcaaagtacacaccaaagacatgcca
ctggcagaggacgtggacctggaatacctagctaaaaacacggaaaaatatgtgggtgca
gatatagaagcagtgtgccgggaagcagtaatgttaaccctgagggataaccttaaagcc
gacgatgtgaaaatgaaatacttcaaaaaagccatgaaaaaggttaaaaccgaagaaaaa
gtagacatggtacaatatcactaa
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