Methanobacterium ferruginis: GCM10025860_11740
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Entry
GCM10025860_11740 CDS
T09214
Name
(GenBank) double-stranded DNA repair protein Rad50
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mfeg
Methanobacterium ferruginis
Brite
KEGG Orthology (KO) [BR:
mfeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfeg03400
]
GCM10025860_11740
DNA repair and recombination proteins [BR:
mfeg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GCM10025860_11740
Archaeal homologous recombinant proteins
GCM10025860_11740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_27
Rad50_zn_hook
AAA_15
AAA_21
SbcC_Walker_B
AAA_29
DUF5082
MukB
AAA_19
NPV_P10
Motif
Other DBs
NCBI-ProteinID:
BDZ67726
LinkDB
All DBs
Position
complement(1118764..1121463)
Genome browser
AA seq
899 aa
AA seq
DB search
MIIESLHIKNFKSHRDTYIDFDTGISIIMGGNGAGKSSILEAISFALFKQHTSKKIDQLI
TIGQKRMSVEMRFIVNGRKYSILRERTKTSSKALMKVKEGDQFHPLVSGDRQVTTEVQEL
LEMDGDLFLNAVYVRQGEIADLIEKTPAEKKEMIGRLLGIDSLEKAWKNMKIVLDKYKDK
KLRLEGKIESFAELKEELNSKKEQEDNFKIEIKTLNREIEEKIIETKLIQEKKEILDKRG
LEFEKNQTLLNSKEQFREQLEKTKKDLDWQLTEITRKEQEIDKLKPKLSRLEVLKSLEEK
GKELKNLNKDKERLINILNDIERFEKILTDNEPYYNDYSLLNNDVNSLQYAKDQFEGSRV
LSQQYTARKLKVEAKMNEALEKTRDALEKSNHILNTHFTSVEELETHLSTFKPQLEAKLQ
KTSKNVHEIQKELSNLQVKNQDLEKPIDELEQVKDRCPICKSTITPEKRYELINDYQTDI
EANIVRSNDLKEKLMEIEAQKENLDLQQSKIQSINLGILKEYLNSVEEDNKEIESINSNL
KELQEKINILEGIEKDIKVKKSQIDGIKGKYENYISVKGSLESLGDIEEHSSHLNEINTS
LRDLKKKISVLMDIAGESIENLPEEIVYLEEMNQKYQRLLGELTQKDALIKRQKETEKLI
QETLEEIEDINKNIVELKYNEKSHERVKNEWNLKNEELNQLTGKKQLLNGQLDQISISIK
ELESKIESFQKYKKELNNLKDFLKLLNFIRDLYGKDGVQKDLRNISRPLIEEKTRELFER
FNFEYSDIKLDEDYDVTIYGPTGESSLDMISGGEKIAVALALRLGITQVLSGGNLELIML
DEPTIHLDAYRRQELIDLLKKMSIIPQMVIVTHDTDLEDAADNILRIEKEKGTSFLVES
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgattattgaaagtctccacataaagaacttcaaatctcaccgggacacttatatcgat
tttgatacaggtatatccataataatgggtggtaacggggcaggtaaatccagtatactt
gaagctatcagttttgcactttttaaacaacataccagcaaaaagattgaccaactgata
actattggacagaaaagaatgtctgtggaaatgagatttattgtaaatggtagaaaatac
agtatactacgagaacgcactaaaacttcttctaaagcgcttatgaaggtaaaagaagga
gatcagtttcatccgttggtttcgggtgaccggcaggttaccactgaagttcaggaattg
ttggaaatggatggagatcttttcctgaatgcagtttatgtcaggcaaggagaaatagct
gatttaatcgaaaaaacacccgcagaaaaaaaggagatgatcggaaggctgctgggtatt
gattcccttgaaaaagcatggaagaacatgaagatcgttttagataagtataaagacaaa
aaattaagattagaaggtaaaatagaatcttttgcagaattaaaagaagaattaaattct
aaaaaagaacaggaagataactttaaaatcgaaattaaaactctcaaccgtgaaatagaa
gaaaaaataattgagactaagttaatccaagaaaaaaaggagattttagataaaaggggt
ttagaatttgagaaaaatcaaaccctcctaaattccaaagaacaattcagggagcaactt
gaaaaaaccaaaaaagatcttgattggcagttaaccgaaataacacgtaaagaacaagaa
atagacaaattaaaacctaaattaagtagattagaggttttaaaaagtctggaagagaaa
ggcaaagaactgaaaaatcttaataaagacaaagaaagactgataaacattttaaatgac
attgaacgttttgaaaagattttaactgataatgaaccatattacaatgattattctctc
ctaaataatgatgtcaacagtttacagtatgccaaggatcagtttgagggaagcagagta
ctttctcaacagtacacagcgagaaagttgaaagttgaagctaaaatgaatgaagccctg
gaaaaaacaagggatgcccttgaaaaatctaaccatattctaaacactcattttacttcc
gttgaagaacttgaaacccacctatcaacatttaaaccccagttagaggcaaaactacaa
aaaacatctaaaaatgttcatgagatacagaaagaattatcaaaccttcaagtaaaaaat
caagaccttgaaaagcccatagacgaattagagcaagttaaagatcgttgcccaatttgt
aaatcaactataacacctgaaaaaagatatgaactaattaacgactatcaaacagatatt
gaggctaatatcgtaaggtctaatgatttaaaagaaaaattaatggaaattgaagctcaa
aaagaaaatttggatttacagcagtctaaaattcagagtataaatctgggtattttaaaa
gaatacttgaactctgtggaagaagataataaagagattgaaagcattaattcaaacctt
aaggagcttcaggaaaaaataaacatcttagaaggtattgaaaaagatatcaaagttaaa
aaatcccaaattgatggtatcaaaggaaaatatgaaaattatatatctgtaaaaggttct
ttagaatctttaggagatattgaagaacattcatctcatttaaatgaaataaacacatcc
ttaagagatttaaaaaagaaaatcagcgtacttatggatattgcaggcgagagtatagag
aatcttccagaagaaatagtttacctagaggaaatgaatcaaaaatatcagcgactgttg
ggtgaactcactcagaaagatgctcttataaagaggcaaaaagaaactgaaaagctcatc
caagagactctggaagaaattgaagacataaacaaaaatatcgttgagttaaagtacaat
gaaaaatctcatgaaagggtaaaaaatgaatggaatttgaaaaatgaagagttaaaccag
ttaactgggaaaaaacagttgttaaatgggcagttagatcagatttccatctccatcaaa
gaattagaaagtaaaatagaatcattccaaaaatataaaaaagagttaaataatcttaaa
gactttttgaagcttttaaactttattagggatctttatggtaaggatggagttcaaaag
gatttaagaaatatatccagaccactcatagaagaaaaaacccgtgaattatttgaaagg
tttaattttgaatacagtgacataaaactggatgaagattatgatgtgactatctatggt
cccactggtgaaagtagtctggacatgatcagtggtggtgaaaaaatagcagtggccctt
gctctaaggttgggaatcacccaggtactttctggaggtaatctggaacttatcatgctg
gatgaacccaccattcacctggatgcttatcgccgacaggaattgattgatttacttaaa
aaaatgtcgattatcccccagatggtcattgttactcatgacactgacttggaggatgct
gctgataatattttgcggatcgaaaaagagaaaggcacttctttcctggtagaatcctga
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