Methanobacterium ferruginis: GCM10025860_12560
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Entry
GCM10025860_12560 CDS
T09214
Name
(GenBank) peptide chain release factor 1
KO
K03265
peptide chain release factor subunit 1
Organism
mfeg
Methanobacterium ferruginis
Pathway
mfeg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mfeg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
GCM10025860_12560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfeg03019
]
GCM10025860_12560
03012 Translation factors [BR:
mfeg03012
]
GCM10025860_12560
Messenger RNA biogenesis [BR:
mfeg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
GCM10025860_12560
Translation factors [BR:
mfeg03012
]
Eukaryotic type
Release factors
GCM10025860_12560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Zn_ribbon_8
DpnI
eIF-5_eIF-2B
PWP3A-B_C
Zn_ribbon_Nudix
Zn_ribbon_RPB9
Zn_ribbon_TFIIB
baeRF_family2
DUF3300
DUF5816
FYVE
Motif
Other DBs
NCBI-ProteinID:
BDZ67808
LinkDB
All DBs
Position
complement(1192888..1194117)
Genome browser
AA seq
409 aa
AA seq
DB search
MSEPSSTELYEVKRTLKELSDKKGRGTELVSVYIPPDRQISDVVKHMREELSQSANIKSK
QTKKNVQSAIEVIMQRMKLFPKPPERGLVLFVGMIPKGGPGTEKMETYVFEPPEPVQTYI
YHCDSQFFLEPLEEIIEDKEVYGLAVIDRKEATIATMRGKRVEIVKNLTSGVPGKHKAGG
QSQRRFDRLIELAAHEFLKRIGDHINEAFLPIEDLKGVIIGGPGHTKEDFINGDYLHHEI
KQKVITTVDTSYTGDFGIREVIDKSMDVLTEIDIMREKKLVQRFLSELVDENGLASYGEA
EVRQNLINGAVEVLLLSEDIKSKRYTYQCTSCGAEEMKTIKNGAEAEDKVCDNCGDTMKP
SSSEDIISEFIKMAEEVGSDVEIISTETEEGMQLFRAFGGIGAILRYRV
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaccatcatcaacagaactttatgaggttaaacgtacacttaaggaactttcc
gataaaaaagggagaggtactgagttggtatctgtttacatacctccagacaggcagatc
agcgatgtggtgaagcacatgcgagaagagctcagtcagagtgcaaacattaaaagtaaa
cagacaaaaaagaatgtgcagtctgctattgaggttataatgcaacgtatgaagcttttc
cccaagccaccagagaggggtctggttcttttcgtgggaatgatccccaagggcggtcca
ggtacagaaaagatggaaacctatgtttttgaacccccagaacctgttcagacttatatt
taccattgtgactctcagttcttcctggaacccttagaggagattattgaagataaggaa
gtctatggattagcagttatagaccggaaagaagcaaccatagccacaatgagaggaaaa
agagtggaaattgttaaaaatctcaccagtggtgttccaggaaagcacaaagcaggagga
caatcacagcgacgtttcgaccgattaattgaactggcagctcatgaattccttaaaagg
ataggtgaccatatcaacgaggcattcctccccatcgaagaccttaaaggagttattata
ggtggtcctgggcatactaaagaagatttcattaatggggattatctacaccatgaaatc
aaacagaaagttatcaccactgtggacacatcatataccggggattttggtatccgagaa
gtgattgacaaatccatggatgttttaaccgaaattgatataatgcgtgaaaagaaattg
gttcaacgtttcctgagtgaactggtggatgaaaatggcctggcatcttatggtgaagct
gaagtcagacaaaacttgataaacggtgcagttgaagttttattactctccgaagacatt
aagtccaaaagatacacttatcagtgcacttcatgtggagctgaagaaatgaaaaccatt
aaaaatggggctgaagctgaagataaagtctgtgataactgtggcgataccatgaaacca
tcttcttccgaggatattattagtgaatttattaagatggctgaagaagttggttcagat
gtagagatcatatccacagaaacagaagaaggtatgcaattattccgggcttttggagga
attggagccatattaaggtatagagtatga
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