Methanobacterium ferruginis: GCM10025860_12770
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Entry
GCM10025860_12770 CDS
T09214
Name
(GenBank) hypothetical protein
KO
K03124
transcription initiation factor TFIIB
Organism
mfeg
Methanobacterium ferruginis
Pathway
mfeg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mfeg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GCM10025860_12770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfeg03021
]
GCM10025860_12770
Transcription machinery [BR:
mfeg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
GCM10025860_12770
Prokaryotic type
Archaeal type
TFB
GCM10025860_12770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_Ribbon_TF
TFIIB
Ribosomal_S27e
RPA_interact_C
Zn_ribbon_LysW
A2L_zn_ribbon
Zn_ribbon_PaaD
Zn_ribbon_Elf1
ORC6_2nd
Trm112p
Zn_Ribbon_YjdM
Motif
Other DBs
NCBI-ProteinID:
BDZ67829
LinkDB
All DBs
Position
complement(1211350..1212057)
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AA seq
235 aa
AA seq
DB search
MGATETKQELVEKNPEITKEKTEVSGKEQMKQDMSEIEKRETKCPECQSEKLINDHERGE
IVCGACGLVIDDNLVDMGPEWRAFDHEQRDKRTRVGAPITYTIHDKGLSTMIDWRNKDIY
GRDIPARNRAQWYRLRKWQRKIRISGATERNLAFALSELDRDSSRLGLPRSVREAASVVY
RNAVENKLIRGRSIEGVVAASLYAACRRCNVPRTLDEIAEVSRVSKKKWVELTVS
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgggggcgacggaaacgaagcaagaattagttgaaaaaaatcctgaaattactaaagaa
aagacggaagtttcaggaaaagaacagatgaaacaggacatgtccgaaatcgaaaaaaga
gagacaaaatgtcctgaatgtcaatctgaaaaacttataaatgatcacgaacgtggagaa
attgtctgcggcgcctgtggtctggttattgacgataacctggtagatatgggtccagaa
tggagggccttcgaccatgaacagcgtgacaagagaaccagggtaggtgcacccataacc
tacaccatccacgacaaaggtctttccaccatgatcgactggaggaacaaggatatctac
ggaagagatatccccgccagaaacagagctcaatggtaccgtctccggaaatggcagaga
aaaatcaggatttcaggtgccactgaacgtaacttggcctttgccctctctgaactggac
cgtgactcctccagattaggactcccccgaagcgtcagggaagccgcatcagtagtatac
cgtaatgccgtggagaacaaactcatcagaggaagaagcattgaaggtgtagttgcagca
tctttatatgccgcttgtagaaggtgcaacgtgcccagaaccctggatgagattgcagag
gtatcacgggtgagtaaaaagaagtgggtagaacttaccgtttcttga
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