Methanobacterium ferruginis: GCM10025860_13480
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Entry
GCM10025860_13480 CDS
T09214
Name
(GenBank) transcription elongation factor Spt5
KO
K15172
transcription elongation factor SPT5
Organism
mfeg
Methanobacterium ferruginis
Brite
KEGG Orthology (KO) [BR:
mfeg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
GCM10025860_13480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfeg03021
]
GCM10025860_13480
03019 Messenger RNA biogenesis [BR:
mfeg03019
]
GCM10025860_13480
Transcription machinery [BR:
mfeg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
GCM10025860_13480
RNA polymerase I system
GCM10025860_13480
Messenger RNA biogenesis [BR:
mfeg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
GCM10025860_13480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
KOW1_SPT5
DUF411
KOW4_SPT5
Motif
Other DBs
NCBI-ProteinID:
BDZ67900
LinkDB
All DBs
Position
complement(1270275..1270718)
Genome browser
AA seq
147 aa
AA seq
DB search
MIYAIRTLVGQEKNVARIIARNVKDSGIGVSAVLVPESLRGYIIVESSTKLDLQNPAFKV
PHMKGAIEGEIPYEEIKSFLKPEPIIASIQKGSIVELISGPFKGEKAKVVRIDESREDVV
LELIEAAVPIPVTVKGDQIRLIQKEAD
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
ttgatatatgcaataagaaccctggtgggtcaagaaaaaaatgtagcccgaataatagcc
aggaatgttaaagatagtgggattggagtaagtgctgtcctggttccggaaagtctgcga
ggatatataatagtagaatcctccaccaagctggatcttcaaaaccctgcttttaaagta
cctcatatgaaaggggccatagaaggcgagattccatatgaagagataaaaagcttttta
aagccggaaccaataatagcttctatacagaagggaagtattgtggaacttatatccggg
ccttttaaaggagaaaaggccaaagtggttaggatcgatgaatcccgagaagatgtagtt
ctagaacttatcgaagccgcagttcctatccctgttacagttaaaggtgatcaaatcaga
ttaatacagaaggaggcagattaa
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