Methanobacterium ferruginis: GCM10025860_14270
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Entry
GCM10025860_14270 CDS
T09214
Name
(GenBank) hypothetical protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mfeg
Methanobacterium ferruginis
Pathway
mfeg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfeg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GCM10025860_14270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfeg03019
]
GCM10025860_14270
03009 Ribosome biogenesis [BR:
mfeg03009
]
GCM10025860_14270
Enzymes [BR:
mfeg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GCM10025860_14270
Messenger RNA biogenesis [BR:
mfeg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GCM10025860_14270
Ribosome biogenesis [BR:
mfeg03009
]
Prokaryotic type
rRNA helicases
GCM10025860_14270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DbpA
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
BDZ67979
LinkDB
All DBs
Position
1353787..1354971
Genome browser
AA seq
394 aa
AA seq
DB search
MDHIHRRTLRMDQVKMIILDEADEMLDMGFRDDIEFVLEQIPDQRQMLLFSATMSPIILG
LTRKYQNNPEMLKVAHQEITVPEIQQIYFEVKEKMKLDLLTRLIDIHNLKLALVFCNTKR
RVDRLVNHLQTRGYFADGLHGDMSQNQRDRVMAKFRKGQIEILVATDVAARGIDVDDVEA
VFNYDVPNNEEYYVHRIGRTGRAGKRGQAFTFVSGKEIYKLRDIQRYTRVRIEQHQIPSP
REVEEVKRDLFMERLKKAINNENLDREVHLVERLMEEDYSSVDIAAALLRLYMGSKDDSS
QTSGSAYEDTGAQPGKVRFFINVGRKQRVKAKDIVRAIGEVSGLSSTSIGRIDVFDKFSF
VEIPEQHAKEVSGALQRKGIKGLRVNLEPANKKM
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggaccatatccaccgcagaactctccggatggatcaggtgaaaatgatcatcttagat
gaggccgatgaaatgctggacatgggattccgggatgatatagaatttgtgttagagcag
atacctgaccagagacagatgttactattttcagccactatgtctcctataattctgggt
ttaacccgaaaataccagaacaatcctgaaatgcttaaagtagctcatcaagaaattaca
gttcctgaaatacaacaaatatactttgaagtcaaggaaaagatgaagctggatttatta
accagacttatagatatacacaatctgaaattggcccttgtattttgtaacactaaaaga
agggttgatcgtttggtaaatcacctgcaaaccagaggatatttcgctgatggattacac
ggtgacatgagtcagaatcagcgtgatagagttatggccaagttccgaaaaggacaaatc
gaaattttagtagctactgatgtggcagcccggggaatagatgtggatgatgtagaggca
gtcttcaattatgacgttcccaacaacgaagaatactatgttcacaggattggaagaact
ggaagggcaggtaaacgtggacaggcattcacatttgtatctggaaaggagatctacaag
ttaagggacatccaacgttacacccgagtaagaattgaacagcatcaaataccttctcct
cgtgaggtagaggaagttaaaagagacctgttcatggaaagactgaaaaaagcgattaat
aacgaaaacctggatagagaagttcatttagttgagcggctgatggaagaagattacagt
tcagttgacatagctgctgctcttctgagactctacatgggaagtaaagatgattccagt
caaactagtggttccgcttatgaggatactggtgcacaacctggaaaggttagattcttt
attaatgtgggccgtaaacaaagagtaaaggctaaagatattgtcagggctattggggaa
gtttcgggattatcttccactagcataggtcggattgatgttttcgataagttctccttt
gttgaaatcccagaacaacatgcaaaagaagtatccggagctctgcaaagaaagggaata
aagggtctcagggttaatctggaacctgccaataagaaaatgtga
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