Methanobacterium ferruginis: GCM10025860_14730
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Entry
GCM10025860_14730 CDS
T09214
Name
(GenBank) exosome complex exonuclease Rrp41
KO
K11600
exosome complex component RRP41
Organism
mfeg
Methanobacterium ferruginis
Pathway
mfeg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfeg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GCM10025860_14730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfeg03019
]
GCM10025860_14730
Messenger RNA biogenesis [BR:
mfeg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
GCM10025860_14730
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
GCM10025860_14730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
BDZ68025
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All DBs
Position
1390235..1390984
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AA seq
249 aa
AA seq
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MIIILTSKSIGNNDKGTLTTSSTKKRRDGRDFDELRPLKIEAGVLERADGSAYLEIGDNK
VLAAVYGPRELHVRRLLKPNMAILRCRYNMAPFSVEDRKRPGPDRRSVEISKLTAEALNP
AVFLEKFPRSTIDVFIEVLQAEGGTRCAGITAASVALADAGIPMRDMVAACAAGKSDGQV
IMDLSEWEDKEGEADLPIAMMPRTGDITLLQMDGHLTSDEFEQALDLAIKGCQIIGEEQK
NAIKNRYGD
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
gtgattattattctaaccagcaaatcaattggaaacaatgataaaggaactttaacaact
tccagtactaaaaaaagacgggatggaagagattttgatgaactaaggcccttaaaaata
gaggcaggggtactggaaagagcggatggttctgcctatctggaaatcggtgataataaa
gttttagcagctgtttatggtcccagagaattacatgttcgccgattattaaagcctaac
atggcaatcctgcgttgccgttacaacatggcaccattttcagtggaagatcgcaaaaga
cctggacccgatcgccgctctgtggaaatatccaaattaaccgcagaagcactcaaccca
gcagtcttcctggaaaaattcccaagatctaccattgatgttttcatagaagttctgcaa
gctgagggaggaacccgatgtgccgggatcaccgcagcatctgtagccctagctgatgca
ggcatacccatgcgagatatggtagcagcatgtgccgcaggtaaatccgatggacaggta
ataatggatctttcagaatgggaagataaagaaggagaagccgacttacccatagctatg
atgccccgtacaggagatataaccctgttacagatggacggacacctcacctctgatgag
tttgaacaggcactggatctggccattaaaggatgccagatcataggcgaagaacagaaa
aatgccataaaaaacaggtatggtgattaa
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