Methanobacterium ferruginis: GCM10025860_14740
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Entry
GCM10025860_14740 CDS
T09214
Name
(GenBank) RNA-binding protein
KO
K12589
exosome complex component RRP42
Organism
mfeg
Methanobacterium ferruginis
Pathway
mfeg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfeg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GCM10025860_14740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfeg03019
]
GCM10025860_14740
Messenger RNA biogenesis [BR:
mfeg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
GCM10025860_14740
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
GCM10025860_14740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
BDZ68026
LinkDB
All DBs
Position
1390986..1391786
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AA seq
266 aa
AA seq
DB search
MVQSIVPEIIRESVTNLIKKGERVDGRALDEYREISLETGVIKKAEGSARVKIGNTQIVV
GAKPQIGEPFPDTPNVGVLITNSELLPMAAPNFEPGPPDERSVELARVTDRCIREGKVVD
LEKLTIIPGKKVWMIFMDMHIVDYDGNLFDAAVLGCLAALMTTKVPSTTIEDDEVVIDYE
KMVPIPINEQPLMCTMAKIGGELVVDPSLEEDDILEARVSIGIRADGSICAMQKGGSVPF
THEEVLKAVGIAQEKTKELRKFIPQA
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagagcattgttccagagatcataagagaaagcgtaaccaacctcatcaaaaaa
ggagaaagggtggatggaagagccctggatgagtaccgggaaataagcttggaaaccggt
gtaattaaaaaagcagaaggatcagccagggtgaaaataggaaacacccagatcgtagtg
ggtgccaaaccccagatcggcgaacccttcccagacacacccaatgtaggtgttctgata
accaactcagagttattacccatggcagcccctaacttcgaaccaggaccacctgatgaa
cgttctgtggaactggccagagtaaccgaccgttgtataagggaagggaaagtagtggac
ctggaaaaattaaccatcatccctggaaaaaaggtatggatgatcttcatggacatgcac
attgtggattatgatggtaacctctttgatgcagcagttctaggctgtttagcagcccta
atgactactaaagtacccagcacaaccatcgaagatgacgaagtcgtaatcgattatgag
aagatggttccaatccccattaatgaacaaccactcatgtgtaccatggccaagatcggt
ggtgaactggttgttgatccttccctagaagaagatgacatattagaagccagggtttcc
ataggtataagagctgatggaagtatatgtgccatgcaaaaaggtggatcagttcccttt
actcatgaagaagtcttaaaagctgtaggtatagctcaggagaagaccaaagaacttcga
aagtttattcctcaggcataa
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