Methanobacterium ferruginis: GCM10025860_17540
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Entry
GCM10025860_17540 CDS
T09214
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
mfeg
Methanobacterium ferruginis
Brite
KEGG Orthology (KO) [BR:
mfeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mfeg03016
]
GCM10025860_17540
Enzymes [BR:
mfeg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
GCM10025860_17540
Transfer RNA biogenesis [BR:
mfeg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GCM10025860_17540
Prokaryotic type
GCM10025860_17540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
FliO
Motif
Other DBs
NCBI-ProteinID:
BDZ68306
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All DBs
Position
1659444..1660259
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AA seq
271 aa
AA seq
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MRKVALKLAYLGTEFYGFQRQPNLRTVEGKLLEALQKVGLINNLGQANYSLAGRTDRGVH
ALGNVVSFRTDQELIINQINDLLPQDMRILGSARVPLGFKARYAHKRHYRYVLAKPPLEE
EWETDKMEEAACLMEGTHNFLNFSRRNERNPIRRVDTVKITPHNQVYLVDVVGESFLWNM
VRKMVAVLLSVGKDELEVEDVQKFLDPQYKAAISPLPPESLILMDVFYQGLQFKEDEYAC
SRFLQALNDECYNHQRMVASTEEMIRTLSSD
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaagtggctttaaaactggcctatttgggaacggagttttatggatttcaaagg
cagcccaacctacgcactgttgagggtaaacttttagaagcactgcaaaaagtgggttta
ataaataatctgggccaggctaactactcccttgcgggtagaactgatcggggagttcat
gctctgggaaatgtggtttcatttcgcacagaccaggaattaataatcaaccagatcaac
gatcttttacctcaggatatgagaattctgggatctgcccgggtaccactgggattcaaa
gccagatatgcgcataaaagacattaccgctacgtgcttgctaagcctcctctggaagag
gaatgggaaacagataagatggaggaagcagcctgtttaatggagggaactcataatttc
cttaacttttccaggagaaacgagcgaaaccctatacggagagtggacacagtcaaaatc
acacctcacaaccaggtatatttggtggatgtggtgggtgagagtttcctttggaacatg
gttcgcaagatggtggcagtcctactcagcgtaggtaaagacgaactagaagtagaagat
gtccaaaaatttctggatcctcaatacaaagcagcgatctctcctttaccaccggaaagc
ttaattttaatggatgttttttatcagggtttgcagtttaaagaggatgaatatgcctgt
tccaggtttttacaggctttaaatgatgaatgttataaccatcaaagaatggttgcctca
actgaggagatgataagaacattatcctctgattga
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