Methanobacterium ferruginis: GCM10025860_21370
Help
Entry
GCM10025860_21370 CDS
T09214
Symbol
rnc
Name
(GenBank) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
mfeg
Methanobacterium ferruginis
Brite
KEGG Orthology (KO) [BR:
mfeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfeg03019
]
GCM10025860_21370 (rnc)
03009 Ribosome biogenesis [BR:
mfeg03009
]
GCM10025860_21370 (rnc)
03036 Chromosome and associated proteins [BR:
mfeg03036
]
GCM10025860_21370 (rnc)
Enzymes [BR:
mfeg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
GCM10025860_21370 (rnc)
Messenger RNA biogenesis [BR:
mfeg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GCM10025860_21370 (rnc)
Ribosome biogenesis [BR:
mfeg03009
]
Eukaryotic type
90S particles
RNase
GCM10025860_21370 (rnc)
Prokaryotic type
rRNA processing factors
GCM10025860_21370 (rnc)
Chromosome and associated proteins [BR:
mfeg03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
GCM10025860_21370 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DndE
LIX1
Motif
Other DBs
NCBI-ProteinID:
BDZ68689
LinkDB
All DBs
Position
complement(2016564..2017226)
Genome browser
AA seq
220 aa
AA seq
DB search
MVPMQLLKRFSIKPIDTHLYHLAFLHESYANEHDLTECYERLEFLGDAVLDLVVSEYLYK
QDPHLTEGQLTQMRANYVCKQALYTYSVELGLDQYIKLGVGAQLNRREMDSVISDVFESF
IGALYLDLGLETVKKFLKKTVILHIDNGDIFFHDYKSKLHQVCTKEGLSLSYELIKEEGE
PHDKTFTMTALVDGETYGTGSGGSKKEAEQNAAKIALHNL
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggtacctatgcaactgttaaaaagattctcaattaaacctattgatacacatctttac
cacctggcttttctccatgaatcctatgccaatgaacatgacctcacagaatgttatgag
agattggaatttttaggggatgctgtcctggatctggtggtatctgaatatttatataaa
caggatcctcatttaaccgaaggtcaattaacccaaatgcgtgctaattatgtgtgtaaa
caagcactatacacttattctgttgaattgggattggatcagtatattaaattgggtgtt
ggtgcccagttaaaccgacgggaaatggattcagttatcagtgacgtgtttgaatcattc
atcggagccttatacctggatttaggactggaaactgtgaaaaaattcctaaaaaaaact
gttatactccatattgacaacggtgacatctttttccatgattataaatctaaattacat
caagtatgtactaaggaaggtcttagtttgagttatgaactcataaaagaggaaggggaa
ccacatgataagactttcaccatgactgccctagttgatggtgaaacttatggtactggt
agtggtgggagtaaaaaagaagcagaacagaatgctgctaaaatagctttgcacaatctt
taa
DBGET
integrated database retrieval system
