Methanobacterium ferruginis: GCM10025860_22270
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Entry
GCM10025860_22270 CDS
T09214
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
mfeg
Methanobacterium ferruginis
Pathway
mfeg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mfeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GCM10025860_22270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfeg03400
]
GCM10025860_22270
Enzymes [BR:
mfeg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
GCM10025860_22270
DNA repair and recombination proteins [BR:
mfeg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
GCM10025860_22270
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Exo_endo_phos2
Motif
Other DBs
NCBI-ProteinID:
BDZ68779
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All DBs
Position
2116363..2117130
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AA seq
255 aa
AA seq
DB search
MTIDILSWNVNGLRARYNKGHLDWILDEKPDIFCFQETKATEDQISETLNGFEDYHTYFS
SSAVKSGFSGVAIYSKTEPLKVIDNLGYGKYKEEGRILKAEYHEFTLFNIYFPSEDGKKL
MDKLNFYNHFLEKMESLSDFHENVIICGDFNIAHNQIDLYNPKQASKNPGYLQLERGLLD
RLIAQGYFDSFRMFNQEPGNYTWWPNGYDSRVKNNGMRLDHFFLTENMKDKVKSAYTRPK
IMGSDHCPIGVEIEL
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgacgatagacattttatcatggaacgtgaatggccttagagctagatataataagggt
catcttgattggatcttagatgaaaaacctgatattttctgttttcaggaaactaaagcc
actgaagatcagattagcgaaacattaaatggatttgaagattatcacacctatttttca
tcttcagctgttaaatctggtttcagtggggttgctatttactctaaaacagagccactc
aaagttatagataatcttggttatgggaaatacaaggaggaaggtagaattcttaaagca
gaataccatgaatttactcttttcaatatttacttccctagtgaagatggaaaaaaatta
atggataaacttaatttctataatcattttcttgagaaaatggagtctctaagtgatttt
catgaaaatgtgattatttgcggtgacttcaacatagctcacaatcaaatagacttatat
aatcctaagcaagcatcaaaaaatcctggttacctacaactagaaagagggcttcttgat
aggcttattgcacaaggctattttgattcattccgtatgtttaaccaggaacctgggaac
tacacgtggtggcccaatggctatgattcccgtgtaaaaaacaatggaatgagattagat
cactttttcctaacagaaaacatgaaagataaagtaaaatcagcttacacccgtccgaaa
ataatggggtcggatcactgtcctattggagttgaaatagaactttag
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