Methanobacterium ferruginis: GCM10025860_22720
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Entry
GCM10025860_22720 CDS
T09214
Symbol
yhaM
Name
(GenBank) HD family phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
mfeg
Methanobacterium ferruginis
Brite
KEGG Orthology (KO) [BR:
mfeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfeg03019
]
GCM10025860_22720 (yhaM)
Messenger RNA biogenesis [BR:
mfeg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GCM10025860_22720 (yhaM)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
HDOD
Cas3_HD
DUF4142
Motif
Other DBs
NCBI-ProteinID:
BDZ68824
LinkDB
All DBs
Position
complement(2154976..2155884)
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AA seq
302 aa
AA seq
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MFKKEEDFIENLNKIRRINTSFVIANKTIKTARNGKNYIEFSLTDKTGEITARMFPNRDA
EEIYDDIEQKSIYNIMGNVDEFPRNSRNFSIKIDSFQKLAEDEYDLDDYTRTSLKDQNQL
IREISTTIKEMKDPYLKDLLKAFFCDKEFAKQFYQSPSAKIHHHNYLGGLLEHTVGVLLI
CKTSCEIFPQLDQDLLYTGAILHDIGKLKSYDYDLVSIDISNEGKLLDHLFISCDMVNEK
IRDNKLEIPEDRKIQLLHIMLSHHGDVQNGWGSPVSPQTPEAVALHHADNLDAKVKGIMQ
KR
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaaaagaagaagatttcattgaaaatttgaataagatccgaaggattaacaca
tcatttgtaattgctaataaaaccatcaaaacagcacgtaatggtaaaaattacattgaa
ttcagtttaactgataaaacaggggaaataactgccagaatgttccctaatagagatgct
gaagagatttatgatgatattgaacaaaagagtatctataatattatgggtaatgtagat
gagttcccccgtaattcccggaatttcagtattaagatagacagtttccagaagcttgct
gaagatgagtatgatcttgatgattacacccggacctctcttaaagaccagaatcaacta
atcagggagatcagcaccaccattaaagaaatgaaagatccatacctgaaagatcttctt
aaagccttcttctgtgataaagaattcgctaaacaattttaccagtctccttcagctaaa
atacaccaccataattacctgggaggcttattggaacacactgtaggtgtcctgttaatc
tgcaaaacttcctgtgaaatttttccccagttagatcaggatttactctacactggagcc
atactacatgatattggtaagttaaaatcttatgattatgacctggtaagtattgatatt
tccaatgaaggaaaactattggatcacctttttatttcatgtgatatggtaaatgagaaa
ataagggataataaactggaaataccagaagatagaaaaatacagctcctgcatattatg
ctgagtcatcatggggatgttcaaaatggttggggatctccggtcagtccccaaactccg
gaagcagttgcactgcatcacgctgacaatttagatgctaaagttaaaggaatcatgcaa
aaaagataa
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