Methanobacterium ferruginis: GCM10025860_27650
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Entry
GCM10025860_27650 CDS
T09214
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
mfeg
Methanobacterium ferruginis
Brite
KEGG Orthology (KO) [BR:
mfeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mfeg03016
]
GCM10025860_27650
Enzymes [BR:
mfeg01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
GCM10025860_27650
Transfer RNA biogenesis [BR:
mfeg03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
GCM10025860_27650
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Sen15
Motif
Other DBs
NCBI-ProteinID:
BDZ69317
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Position
2643013..2643522
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AA seq
169 aa
AA seq
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MNAELKGELVIIKDKKAVALHEKSHYGKFNQEELQLSIMEAFFLQEKGKIKIQDKKQGKV
LSLDEMWELIQNKGLLYKYLVFRDLRNRGYIVKTGFKYGSEFRLYERGKSPGDGHSDYVV
KVVTEDEDISVLNFSSYVRVAHGVNKKLLLAVVDDEQDITYYNVEWTRP
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcagagttaaaaggagaactagtaatcatcaaagataaaaaggctgttgccctt
catgaaaaaagtcattacggtaaatttaaccaggaggaactgcaactttccattatggag
gcgttttttctccaggaaaagggaaaaataaagatccaggataaaaagcaaggaaaagtt
ttatccttagatgaaatgtgggaactcatccagaataaagggttattatataaatatttg
gtttttagggaccttcgcaaccggggatatattgttaaaaccggtttcaaatatggttca
gagttcagactctatgaacgaggaaaatcccctggtgatggtcattctgactatgtggtg
aaagtggtaactgaagacgaggacatatctgtacttaacttttcaagttatgttcgtgtg
gctcatggggttaacaagaaactcttactggcagtggtggatgatgaacaggacatcacc
tactacaatgttgagtggacccgaccataa
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