Methanobacterium ferruginis: GCM10025860_28980
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Entry
GCM10025860_28980 CDS
T09214
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mfeg
Methanobacterium ferruginis
Brite
KEGG Orthology (KO) [BR:
mfeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfeg03032
]
GCM10025860_28980
03400 DNA repair and recombination proteins [BR:
mfeg03400
]
GCM10025860_28980
Enzymes [BR:
mfeg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GCM10025860_28980
DNA replication proteins [BR:
mfeg03032
]
Prokaryotic type
DNA Topoisomerases
GCM10025860_28980
DNA repair and recombination proteins [BR:
mfeg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GCM10025860_28980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
BDZ69450
LinkDB
All DBs
Position
complement(2769186..2771333)
Genome browser
AA seq
715 aa
AA seq
DB search
MHEVIVCEKPKASEKIASAIPGKAVKKSYKRVPYYEIDEGNKKTTVLSAVGHLYSLSPLK
KEKGRMFEVGWVPLYEKDKSKKYVKNYIDAIKKFSKDADRFVHACDYDIEGTLIGFNALK
YACGPESIDNAVRMKFSTLTKEDLLKAYNEPIDLDFNQVDSGEARHVLDFLFGVNISKDL
TDSVMKATSRYIQLSAGRVQTPTLAILVEREKEIQSFIPEPYWLIKAEIEGNIIADHKKG
KIFDKKVEEEILADCDGKDARVSQIKVKETPQLPPVPFDLGALQSEAYGVFGFSPKKTQS
IAQNLYAEGYTSYPRTSSQKLPPSIGYKKILGKLKKNAAFKKQIEKLKEPIKPREGKKTD
EAHPAIHPTGLVPKGLGRDYQKLYELIVYRFISVFGENGILETMKTELDIGGQPFSFSRK
RMAKMGWREHYPYRKVENDEFPALKEGDSLGARAYSEEKETKPPARYNQASLIRELEKRG
LGTKSTRANIISILYDRKYVEGKKITVNQLGEHLIDTLKKYSEKITSEELTREFETKLEG
IMKAEVKKDEIIAEAKAEVSSILDDIDANKIKIGEELYASYRESMIVGKCKCGGNLIMIN
SPKGGSFVGCTSYPDCKSTYSMPRGATVLKTKCEKCGLPMISFGKPRQRACMDPKCGREG
EEPTQNEVVGVCPECGKDLIKRRGRYGEFVGCSGFPRCRYTRSLEEKEDQKSEKT
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaagtaatagtatgtgaaaaaccaaaggcatccgagaagatagccagcgccata
ccgggtaaggctgttaaaaagagttataagagggtaccttactatgaaatagatgaaggt
aacaaaaaaaccacagttttatcagctgtaggtcatttatactctttatcacccttaaaa
aaggaaaaaggacgtatgtttgaagtgggatgggtgccactttatgagaaggataagagt
aaaaaatatgtcaagaactacattgatgctataaaaaagttctctaaagatgcagatcgg
tttgtacatgcttgcgattatgatattgaaggtactttaattggttttaatgctttaaaa
tatgcatgcggtccagaaagcattgataatgcagtgcgtatgaagttctccacccttacc
aaagaggatcttttaaaggcttacaatgagccaattgacctggatttcaatcaggtcgac
agtggggaggccaggcatgtcttggatttcttatttggggttaacatatccaaagacctc
acagattctgtgatgaaagccaccagtcgctacatacagctctctgccgggagagtgcag
actcccaccctagctatactggtagaaagggagaaagaaattcagagtttcattcctgaa
ccttactggctcatcaaagcagaaattgaaggaaacataattgcggatcataaaaaaggg
aaaatcttcgataaaaaggttgaagaagaaattctggctgattgtgatggtaaagatgcc
agagtaagtcagataaaggttaaagaaaccccacaacttccaccagttccctttgatctg
ggtgctctccagtctgaagcctacggtgtttttggtttcagccccaagaaaacccagtcc
attgcccagaatttgtatgcagaaggttacacatcctatccccgtacttcttcccagaaa
ttacctcccagtattggttataagaagatattgggaaaacttaaaaagaacgctgcattc
aaaaagcagattgaaaaacttaaagaacccattaaaccacgggaaggtaaaaaaaccgat
gaagcccaccctgccatccaccccacaggcttggttcccaaagggttagggagagattat
caaaaactatacgaactcatagtctacagattcatcagtgttttcggagaaaatggcatc
ctggaaaccatgaaaacagaactggatattggaggccagccattcagcttcagcaggaag
aggatggctaaaatgggttggagagaacattacccttatcgtaaagttgaaaacgacgag
ttccccgctttaaaagaaggggatagtttgggagctcgggcttattctgaagaaaaggaa
actaaaccacctgccaggtacaatcaggcttcacttatccgggaactggaaaaaagaggg
cttggaacaaaatccacacgtgcaaatatcatatccattttatatgaccggaaatatgtt
gaaggtaagaagatcactgttaaccagttaggagaacatcttattgatacccttaaaaaa
tactccgagaagatcaccagtgaagaactcacccgagaatttgaaaccaaattagaaggc
ataatgaaggctgaagttaaaaaagatgagataatagctgaagccaaagcagaagtaagt
tctatattggatgatattgacgcaaacaaaatcaaaataggggaagaactttacgcatcc
tacagagagagcatgatcgtgggtaaatgtaaatgcggcggcaacctcatcatgatcaac
tcccccaaaggaggtagtttcgtgggttgcacttcctatcctgactgtaaatcaacttat
tccatgcctcgcggagctacggttcttaaaacaaaatgtgagaaatgtggcctgcccatg
atatcctttggaaaaccccgacaaagagcctgcatggatcccaaatgtggacgtgaagga
gaagaacctacacaaaacgaggtggtaggggtctgtccagaatgtggaaaagatctcatc
aaaagaagaggacgttacggtgaatttgtaggatgcagtggttttccacgatgtcgatac
actcgttctttggaagaaaaagaggatcaaaaatctgaaaaaacttga
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