Mycoplasma feriruminatoris: D500_00471
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Entry
D500_00471 CDS
T07962
Name
(GenBank) HD domain protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
mfer
Mycoplasma feriruminatoris
Brite
KEGG Orthology (KO) [BR:
mfer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfer03019
]
D500_00471
Messenger RNA biogenesis [BR:
mfer03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
D500_00471
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
TraI_2
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
UKS54119
LinkDB
All DBs
Position
complement(536057..537037)
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AA seq
326 aa
AA seq
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MKKVKDINIKDHLIDTILRIERVIVSTGSSGNNYLILHLADSSGRIEARKWIVNEKDKQL
LKPNAIILLKDTLVHEYRNILQLKIEDYLIIDEKDLIKYHLNKTDLYISAPLDIKTNYQE
LISLLNSINNQTYKTITLSLLEKYKKEFLTFPAAMSIHHNVTSGLFWHSYTLVKNVLSLK
QNYFYANIDWDLLICGAILHDIGKVIEIADVNGSDYSLEGKLLGHISIGNAEINKLAEQL
NLYKDQNNKINQEITLLQHMILASHGKKEFGSPIEPVLIEAVILSTLDDLDAKVYKINDE
LSKIELDTWTQKIVSIDNRMFYKHKK
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagttaaagatattaatataaaagatcatttaatagatactattttaagaatt
gaaagagttatagtttcaacaggaagtagcggaaataattatttaatattacatttagct
gatagtagtggaagaattgaagctagaaaatgaatagttaatgaaaaagataaacagtta
ttaaaaccaaacgctattattttattaaaagatactttagttcatgaatatcgaaatata
ttgcaattaaaaattgaagattatttaataattgatgaaaaagatttaataaaatatcat
ttaaataaaactgatttatacatttctgctcctttagatattaaaactaattatcaagaa
ttaattagtcttttaaatagtattaataatcaaacttataaaactattacacttagtttg
ttagaaaaatataaaaaagaatttctaacttttcctgctgctatgagtattcatcacaac
gttactagtgggttgttttgacatagttatactcttgtaaaaaacgttttaagtttaaaa
caaaattatttttatgcaaatattgactgagatttactaatatgtggagctattctacat
gatattggtaaagttattgaaatagctgatgttaatggtagtgattatagtttagaagga
aaactactaggtcatatttcaataggaaatgctgaaattaataaactagctgaacaatta
aacttatataaagatcaaaataataaaattaatcaagaaattactttactacaacacatg
attttagctagtcacggtaagaaagaatttggttcccccatcgaaccggtgttaattgaa
gctgtgattttatcaactttagatgatttagatgctaaagtttataaaattaatgatgaa
ttatcaaaaatagaactagatacttgaactcaaaaaattgtaagtatagataatagaatg
ttttataaacataaaaaatag
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