Micromonospora ferruginea: H1D33_01265
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Entry
H1D33_01265 CDS
T09299
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mfeu
Micromonospora ferruginea
Pathway
mfeu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfeu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H1D33_01265 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfeu03021
]
H1D33_01265 (rho)
03019 Messenger RNA biogenesis [BR:
mfeu03019
]
H1D33_01265 (rho)
Transcription machinery [BR:
mfeu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
H1D33_01265 (rho)
Messenger RNA biogenesis [BR:
mfeu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
H1D33_01265 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
QLQ37568
UniProt:
A0A7L6B6R3
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All DBs
Position
6599831..6601936
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AA seq
701 aa
AA seq
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MSDTTDVTSDVSNVAGDATTAAPTRRRRSGTGLSAMLLPELQSLAASLGISGTARMRKGE
LISAITERQGGAAAGTPRPRAEVAAAAAPAREEVHAEVSKDRAEGERRTAEQAPAAEVTE
GRTRGRRSRATAASAETRPAETRAEEAPAETGDRAERGADRAERGGDRAERTDERGRERA
ERGGDRNDRGDRADRTDRGDRSERAERGDRTERGDRNDRGERAERGDRTERGERNDRGER
AERGDRNDRGDRNDRGDRNDRGDRNDRGDRNDRGPRADRDDDDDEGGGRRGRRSRFRDRR
RGRGERGEGGDGGGGGGREPQVGEDDVLVPVAGIIDVLDNYAFVRTTGYLAGPNDVYVSM
SQIKKYGLRRGDAITGAVRAARDGEQRRDKYNPLVRLDTINGMEPEEARRRPEFYKLTPL
YPQERLRLETEPHILTTRVIDLVMPIGKGQRALIQSPPKAGKTMVLQAIANAITRNNPEC
HLMVVLVDERPEEVTDMQRSIKGEVIAATFDRPPQDHTTVAELAIERAKRLVELGHDVVV
LLDSVTRLGRSYNLAAPASGRIMSGGIDSTALYPPKRFLGAARNIENGGSLTIIATALVE
TGSMADTVIFEEFKGTGNAELKLDRKIADKRVFPAIDINPTGTRKEEVLFAPEELAIIHK
LRKVLHSLDSQAALDLLLDRLKQSRTNIEFLMQIAKSTPGE
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgacaccaccgacgtgacgtcggatgtttccaacgtcgctggcgatgccaccacc
gccgcccccacgcgtcgtcggcgcagcggcaccggcctgtcggcgatgctgctgccggag
ctgcagagcctggccgcgtcgctcggcatctccggcacggctcgcatgcgcaagggcgag
ctgatcagtgcgatcaccgagcggcagggcggcgccgccgccggaacccctcgaccgcgg
gccgaggtcgctgccgcggctgctcccgcccgtgaggaggtgcacgccgaggtctccaag
gaccgggccgagggtgagcgtcgcaccgccgagcaggcgccggccgccgaggtgaccgag
ggtcgtaccaggggtcgccgcagccgggccaccgccgcgagcgccgagacgcgcccggcc
gagacgcgtgccgaggaggctcccgccgagaccggcgaccgggccgagcgcggcgccgac
cgggcggagcgcggcggcgaccgggccgagcgcaccgacgagcggggccgtgagcgggcc
gagcgcggcggcgaccgcaacgaccggggtgaccgtgccgaccgcaccgaccggggcgac
cgcagcgagcgtgccgagcggggtgaccgcaccgagcgcggtgaccgcaacgaccggggc
gagcgtgccgagcggggcgaccgcaccgagcggggcgagcggaacgaccggggcgagcgc
gccgagcgcggtgaccgcaacgaccggggcgaccgcaacgaccggggtgaccggaacgac
cggggtgaccgcaacgatcgcggcgaccgcaacgaccggggcccgcgtgcggaccgggac
gacgacgacgacgagggcggcggccggcggggtcggcgcagccggttccgggaccgtcgg
cgtgggcgcggtgagcgtggcgagggcggcgacggcggcggtggcggcggccgcgagccg
caggtcggcgaggacgacgtgctcgtcccggtcgccggcatcatcgacgtgctcgacaac
tacgccttcgtccggaccaccggctacctggccggcccgaacgacgtgtacgtctcgatg
tcccagatcaagaagtacggcctgcgccgcggtgacgcgatcaccggcgcggtccgggcg
gcccgggacggcgagcagcggcgcgacaagtacaacccgctggtccggctggacaccatc
aacggcatggagccggaggaggcgcgccggcggccggagttctacaagctcaccccgctc
tacccgcaggagcggctgcggctggagaccgagccgcacatcctgaccacccgggtcatc
gacctggtgatgccgatcggcaagggtcagcgtgcgctcatccagtcgccgcccaaggcg
ggcaagacgatggtgttgcaggcgatcgcgaacgcgatcacccgcaacaacccggagtgc
cacctgatggtggtgctggtggacgagcggcccgaagaggtcaccgacatgcagcggtcg
atcaagggcgaggtcatcgcggccacgttcgaccgtccgccgcaggaccacaccacggtg
gccgagctggcgatcgagcgggccaagcgcctggtcgagctggggcacgacgtggtcgtg
ctgctcgactcggtgacccggctgggccggtcgtacaacctggcggcgccggcctccggc
cggatcatgtcgggtggtatcgactccaccgcgctctacccgccgaagcgattcctcggc
gccgcccgcaacatcgagaacggcggctcgctgaccatcatcgccacggcgctggtggag
accgggtccatggcggacacggtcatcttcgaggagttcaagggcaccggcaacgccgag
ctgaagctggatcggaagatcgccgacaagcgcgtcttcccggccatcgacatcaacccc
accggcacgcgcaaggaggaggtcctgttcgcgccggaggagttggcgatcatccacaag
ctccgcaaggtgctgcactcgctggactcgcaggcggcgctcgacctcctgctggaccgg
ctcaagcagtcccgcaccaacatcgagttcctgatgcagatcgcgaagtccactccgggc
gagtga
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