Micromonospora robiginosa: H1D33_02000
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Entry
H1D33_02000 CDS
T09299
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mfeu
Micromonospora robiginosa
Pathway
mfeu03420
Nucleotide excision repair
mfeu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mfeu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H1D33_02000
03430 Mismatch repair
H1D33_02000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfeu03400
]
H1D33_02000
Enzymes [BR:
mfeu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H1D33_02000
DNA repair and recombination proteins [BR:
mfeu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H1D33_02000
MMR (mismatch excision repair)
Other MMR factors
H1D33_02000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QLQ37697
UniProt:
A0A7L6B6W6
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All DBs
Position
6436509..6439988
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AA seq
1159 aa
AA seq
DB search
MTIQPALFDAAGTPAPRTADAGPRYTPVELARLLRLPAPTREQAAIIAAPVEPLLVVAGA
GSGKTETMAARVVWLVANAYVRPEHILGLTFTRKAAGELAHRVRTRLDQLVRRLGRPRRD
PRDDPFAGEPTVSTYHSYAGRIVTEHGLRAGYEPTTRLLTEASRWQLVDLLVRNYDGDMS
EVDRMPSTITDAVLALAGELDEHLVDPDELAGWTGRFFAEVQSRPGRVYADVRRALQLQR
TRLKLLPLVRAYGRRKDDFEAMDFADQLARAARVTRDHPGVGVIERDRYRVVLLDEYQDT
SHAQVVLLNALFGGGHPVTAVGDPCQSIYGWRGASAGTLDRFPGEFARADGTPADVLGLT
TSWRNRPEILDVANALSVPLRAAGARVPELHAALSVSDPIPHRTPAGRAGGTVHCALLPT
YADEADWIADSVLAAWRGAAGMPGALPEHIPADRRPTTAVLVRLRSQIPAIEAALRARGL
PVDVVGLGGLLDTPEVRDVVCTLRVLADPTDGAALLRLLTGARWRIGPRDLVALHRRARA
IARGRRELTGDDGPEIVVDVLDEATLVEALADLGPAQAYSAEGFARLRSYGMELALLRYR
LDQSLPELIADIERTIGLDVEVAVRAGRDGAGDAGLARAHLDALGDVAARFSGETPGATL
AGFLAYLSAAEDEERGLAPGEVEVVAGAVQVLTAHAAKGLEWDVVSVAGLTRGVWPGPVR
NSDHWLGGLGVLPFPLRGDADGLPELALPEAADQRAVARALAEFTDAWRAHDEREERRLA
YVAVTRPRRLLLCSGYWWGEGTKRFRGPSVFLREVHDAGLTGADGHVVDAWAPEPAGDAV
NPTTETVLRAEWPADPLGGRRPALTEAAALVRRHLADPEAARREAALLATVADTAIPATG
AGAIGTRVGDGAAAGAGGVAGAEEPAPADPEVARWRREADLLLAERAELARRAEAVEVEL
PGQLSVTQLVALRRDPEALARTLRRPMPSEPSPYARRGTAFHAWLEQRFGADRLLDVDEL
PGAADEGAAPDDALTELQERFLASEWADRVPVEVEVPFATVIAGVVVRGRMDAVFARPGG
RFDVVDWKTGRQPAGREAEAAAVQLAVYRLAWAELAGVPVDRVGAAFHYVRDAVTVRPAD
LLDVEGLTGLVTAVPEFAA
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccaaccggcgctgttcgacgccgccggcacgcccgcgccccggaccgccgac
gccggcccccgctacacgcctgtcgagctggcccggctgctccggctgccggcgcccacc
cgggaacaggccgcgatcatcgcggcgccggtggagccgctgctggtggtcgcgggcgcc
gggtcgggcaagaccgagacgatggccgcccgggtggtctggctggtcgccaacgcgtac
gtgcgccccgagcacatcctcgggctcaccttcacccgcaaggcggccggcgagctggcg
caccgggtgcggacccgcctcgaccagctcgtccgtcgactgggccggccgcgccgggat
ccgcgcgacgatccgttcgcgggcgagccgacggtgtccacctaccactcgtacgcgggg
cggatcgtcaccgagcacgggctgcgcgccggctacgagccgaccacccggctgctcacc
gaggcgtcccgctggcagttggtggacctgctggtgcgcaactacgacggggacatgtcc
gaggtggaccggatgccgtccaccatcaccgacgcggtgctggccctcgccggcgagctg
gacgagcacctggtcgacccggacgagctggccggctggaccggccggttcttcgccgag
gtgcagtcgcgccccggccgggtctacgccgacgtgcgcagggcgctccagctccagcgg
accaggctgaagctgctgccgctggtccgggcgtacggccggcgcaaggacgatttcgag
gcgatggacttcgccgaccagctcgcccgcgcggcccgggtgacccgcgaccacccgggc
gtcggggtcatcgagcgggaccgctaccgggtggtgctgctcgacgagtaccaggacacc
agccacgcgcaggtggtgctgctcaacgcgctgttcggcggcgggcacccggtcaccgcc
gtgggcgacccgtgccagtccatctacggctggcgcggggccagcgccggcacgctggac
cggttcccgggcgagttcgcccgcgccgacggcacccccgccgacgtgctgggtctcacc
acgagctggcgcaaccggccggagatcctcgacgtcgccaacgcgctctcggtgccgctg
cgggccgccggggcgcgggtgcccgagctgcacgccgcgctcagcgtcagtgatccgatc
ccgcaccgcacgcccgccggtcgggccggcggcaccgtgcactgcgcgctgctgccgacg
tacgccgacgaggccgactggatcgcggacagcgtgctggcggcgtggcggggcgcggcc
gggatgccgggcgcgctgcccgagcacatcccggccgaccgccggcccaccaccgccgtg
ctggtgcggctgcgcagccagatcccggcgatcgaggcggcgttgcgggcccgggggctg
ccggtggacgtggtcgggctcggtggcctgctggacaccccggaggtacgggacgtggtg
tgcaccctgcgggtgctggccgacccgaccgacggggcggcgctgttgcggctgttgacc
ggcgcgcgctggcggatcggcccgcgtgacctggtcgccctgcaccggcgggcccgggcc
atcgcccgcggtcgccgggagctgaccggggacgacggcccggagatcgtcgtggacgtg
ctggacgaggcgacgctggtcgaggcgctggccgacctcgggccggcccaggcgtactcg
gcggagggcttcgcccggctccggtcgtacgggatggagctggcgctgctgcgctaccgg
ctggaccagtcgctgccggagctgatcgcggacatcgaacgcacgatcgggttggacgtg
gaggtggcggtccgggccggccgggacggcgccggggacgccgggctggcccgtgcccac
ctggacgcgctcggcgacgtggcggcccggttcagcggcgagacgccgggcgccacgctc
gccggtttcctggcctacctgtccgccgccgaggacgaggagcgtgggctggccccgggc
gaggtcgaggtggtggcgggcgcggtgcaggtgctcaccgcgcacgccgcgaagggcctg
gagtgggacgtggtgtcggtggccgggctgacccggggcgtctggccggggccggtacgg
aactccgaccactggctgggcgggctcggcgtgctgccgttcccgctgcgcggcgacgcg
gacgggctgcccgagctggccctgccggaggccgcggaccagcgtgcggtggcccgcgcg
ctggccgagttcaccgacgcctggcgggcgcacgacgagcgggaggagcgccggctggcg
tacgtggcggtgacccggccccggcggctgctgctctgctccggctactggtggggggag
gggacgaagcggttccgggggccgtcggtgttcctgcgcgaggtgcacgacgccggtctc
accggcgcggacgggcacgtggtcgacgcgtgggcgccggagccggccggggacgcggtg
aacccgaccaccgagacggtgctgcgcgcggagtggccggccgacccgctcggcggtcgc
cggccggcgttgacggaggcggcggcgctggtccgccgtcacctcgccgacccggaggcg
gcccgccgcgaggcggccctgctggccaccgtcgccgacaccgcgatcccggcgaccggc
gccggtgcgatcgggacccgggtgggcgacggcgccgcggccggagccggcggggtggcc
ggggccgaggagccggcgccggcggatccggaggtggcccggtggcggcgggaggccgac
ctgctcctcgccgagcgggcggagctggcccgccgggccgaggcggtcgaggtggaactg
cccggccagctctcggtgacccagttggtggcgttgcggcgcgaccccgaggcgctggcc
cgtacgctgcgccggccgatgccgagcgaacccagcccgtacgcgcggcggggcaccgcc
ttccacgcctggctggagcagcgcttcggcgccgaccggctgctggacgtcgacgagctg
cccggcgccgccgacgagggcgccgcgccggacgacgcgctgaccgagttgcaggagcgc
ttcctggccagcgagtgggccgaccgggtgccggtggaggtcgaggtgccgttcgccacg
gtgatcgccggcgtggtggtgcggggccggatggacgcggtcttcgcccgtccgggcggg
cgcttcgacgtggtcgactggaagaccggccggcagcccgccggccgggaggccgaggcg
gcggcggtgcagttggcggtctaccggctggcctgggcggagctggcgggcgtgccggtg
gaccgggtgggcgcggcgttccactacgtccgggacgcggtgacggtccgcccggccgac
ctgctcgacgtcgaggggctgaccggcctggtgaccgccgtaccggaatttgcggcgtga
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