Micromonospora robiginosa: H1D33_02230
Help
Entry
H1D33_02230 CDS
T09299
Name
(GenBank) AlkA N-terminal domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
mfeu
Micromonospora robiginosa
Pathway
mfeu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mfeu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H1D33_02230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mfeu03000
]
H1D33_02230
03400 DNA repair and recombination proteins [BR:
mfeu03400
]
H1D33_02230
Enzymes [BR:
mfeu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
H1D33_02230
Transcription factors [BR:
mfeu03000
]
Prokaryotic type
Helix-turn-helix
AraC family
H1D33_02230
DNA repair and recombination proteins [BR:
mfeu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H1D33_02230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
RecR_HhH
HHH
Motif
Other DBs
NCBI-ProteinID:
QLQ37738
UniProt:
A0A7L6B789
LinkDB
All DBs
Position
complement(6383815..6385266)
Genome browser
AA seq
483 aa
AA seq
DB search
MELDFERCYRAVDSRDPRFDGWFYTGVTSTGIYCRPSCPAMTPKRQNVRFFPSAAAAQGA
GLRACRRCRPDAAPGSPQWDVRADLVGRAMRLIADGVVDRDGVPGLADRLGYTERHLHRM
LREGLGAGPLALARAQRAQTARILVETTGLGLAEVAFAAGFGSVRQFNETVREVYGVTPS
ELRAGRSTRQAAGGAGTITLRLAHRPPLHAGALLDFLALRALPGVEEVRDGAYHRGLRLP
HGPATVTLAPADGHVAATLRLADMRDLAPAVARCRRLLDLDADPVAVDATLAGDPALAPA
VAAEPGVRLPHAVDGFEMAVRAVTTQQVSLRSARTTLTHLLAAVRRADGSAVDLTPGGPR
AFPSPAEVLAAPDAAFRMPGARRETIRALARAVADGELDLEPGGDREEAVRQLTALPGVG
PWTAGYLAMRALGDPDVILATDLGVRRGAAALGLPDDPKTLHAYADRWRPWRSYATIRLW
RAT
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggaactggacttcgagcggtgctaccgggccgtcgacagccgcgacccgcggttcgac
ggctggttctacaccggtgtcacctcgaccgggatctactgccggccgtcctgcccggcg
atgacgccgaagcggcagaacgtccggttcttcccgtccgccgccgccgcccagggcgcc
gggctgcgggcctgccgccggtgccggcccgacgccgcgccgggctcgccgcagtgggac
gtccgggccgacctggtgggtcgcgcgatgcggctgatcgccgacggtgtggtcgaccgg
gacggcgtgcccgggttggccgaccggctgggctacaccgagcggcacctgcaccggatg
ctccgggaggggctgggcgccggcccgctcgcgctggcccgggcgcaacgcgcgcagacc
gcccggatcctggtcgagaccaccgggctcggcctcgccgaggtggccttcgccgccggg
ttcggcagcgtgcggcagttcaacgagacggtccgcgaggtctacggcgtcaccccgtcc
gagctgcgggccggccggagcacccgacaggcggccggcggggcgggcaccatcacgctg
cgcctggcccaccggccgccgctgcacgcgggcgcgctgctggacttcctcgcgctacgc
gcgctgcccggcgtcgaggaggtccgcgacggtgcctaccaccggggcctgcgcctgccg
cacgggcccgccacggtgacgctggccccggccgacgggcacgtggcggccacgctccgg
ctggccgacatgcgcgacctggcgcccgcggtggcccggtgccgccgcctgctcgacctc
gacgcggacccggtcgcggtggacgccaccctggccggcgacccggccctggccccggcg
gtcgccgccgagcccggggtccggctgccgcacgcggtggacggcttcgaaatggccgtc
cgggccgtcaccacccagcaggtctcgctgcgctcggcccggaccacgctcacccacctg
ctcgccgccgtccggcgtgccgacgggtcggccgtcgacctcacgccgggcgggccgcgg
gcgttcccgagcccggccgaggtgctcgcggcgccggatgcggcgttccggatgccgggg
gcccggcgggagacgatccgggcgctggcccgggccgtcgccgacggtgagctggacctg
gagccgggcggcgaccgggaggaggcggtgcggcagttgaccgcgctgcccggcgtcggg
ccctggaccgccggctacctggccatgcgcgcgctcggcgatcccgacgtcatcctcgcc
accgacctgggcgtccgccggggcgcagccgcgctcggcctgcccgacgacccgaagacc
ctgcacgcctacgccgaccgctggcgcccctggcggtcgtacgcgacgatccgactctgg
agagcgacatga
DBGET
integrated database retrieval system
