Micromonospora robiginosa: H1D33_06955
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Entry
H1D33_06955 CDS
T09299
Symbol
gyrA
Name
(GenBank) intein-containing DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
mfeu
Micromonospora robiginosa
Brite
KEGG Orthology (KO) [BR:
mfeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfeu03032
]
H1D33_06955 (gyrA)
03400 DNA repair and recombination proteins [BR:
mfeu03400
]
H1D33_06955 (gyrA)
Enzymes [BR:
mfeu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
H1D33_06955 (gyrA)
DNA replication proteins [BR:
mfeu03032
]
Prokaryotic type
DNA Topoisomerases
H1D33_06955 (gyrA)
DNA repair and recombination proteins [BR:
mfeu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H1D33_06955 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
LAGLIDADG_3
Intein_splicing
TPD52
Motif
Other DBs
NCBI-ProteinID:
QLQ38578
UniProt:
A0A7L6B9P3
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All DBs
Position
complement(5416872..5420648)
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AA seq
1258 aa
AA seq
DB search
MTDTPESTPNEPETPETPTAVVQHDRIEPVGLEVEMQRSYLDYAMSVIVGRALPDVRDGL
KPVHRKILYAMFDSGYRPDRGYVKCSRVVGDVMGQFHPHGDSAIYDALVRMAQPWSLRYP
LVDGNGNFGSPGNDPAAAMRYCVTADVRIRTFDGSVRMGDVVPDAAPSSETDIELKVRDR
NGDLVRASKFFHSGEHPTLRLRTREGYELTGTHNHPVLCLVNVAGVPTLLWKLLAEVSRG
DRVVLQRTVPDEIGYPMLEHVEAAVLAGAYVSEGWTSGDRVGFDNCDREFFVRVLAAYDL
AVGGRRWVGTETTVTGKTLHKLRGWISDFAGSALGELVGARSAAKFVPEFVWRGPAAVKR
AFLQALFEGDGSSSLLPRHTIQVSYSTRSERLAREVQQLLLEFGVISRQCRYEDGEIKVV
ITNRRDARIFAAHVGFLGRKQAKLESELASVPATSTALSGDMVPFVGDFIREHGATRWTE
RDWLRRHNVDRVERWERDRDEIAARITEPGILDVVEPLVDGRFYYAEVTEVTDAGARPVY
SIRVDTDDHSFVSDGFVSHNTECKLDPLAMEMLRDIDEDTVDLQDNYDGRAKEPTILPSR
IPNLLINGSEGIAVGMATKIPPHNLREIGAAVQWCLENPEADEATTLEALLEIVKGPDFP
THGLIVGQQAIQDAYRTGRGSIRMRAVVEVEEDKRGRPALVVSELPYQVNPDNLAERIAE
LIKEGKLAGIADIRDESSGRTGMRIVLVLKRDAVAKVVLNNLYKHTQLQETFGANMLALV
DGVPRTLNLAQFIRYYVEHQIEVIRRRTAFRLRKAEERAHILRGLSKALDALDEVIALIR
RSPTVEDARQGLIRLLEIDEVQATAILDMQLRRLAALERQRILDDLAKLEVEIADLKDIL
AKPERQRKIVSDELGEIVAKWGDDRRTKIIPFDGEVSMEDLIAREDVVVTITRTGYAKRT
KVDLYRSQRRGGKGVSGATLRQDDIVSHFFVCSTHDWILFFTNKGRVYRAKAYELPEASR
VAKGQHVANLLAFQPDEQIAQIIEIPNYQVAPYLVLATKNGLVKKTRLEEFDSNRSGGII
AVNLRDEDELVGAVLVAPEDDLLLVSKNAQAIRFNATDEALRPMGRATSGVIGMRFSGED
ELLAVEVVREGLDVLVATNGGYAKRTPIEEYPVQGRGGKGVLTAKITERRGGLVGAAVID
PEDELFAITSNGGVIRTPVKPVRRTRDRNTMGVKLMDLPDGVTIVAIARNADEPDEQD
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatactcccgagtccaccccgaacgagccggagaccccggagacaccgaccgcg
gtcgtccagcacgaccggatcgagccggtcggcctcgaggtcgagatgcagcgctcgtac
ctcgactacgcgatgagcgtcatcgtcgggcgcgccctgccggacgtccgggacgggctc
aagccggtccaccgcaagatcctctacgccatgttcgactccggctaccggccggaccgc
ggctacgtgaagtgctcccgcgtcgtcggtgacgtgatgggccagttccacccgcacggc
gactcggccatctacgacgcgctggtccggatggcgcagccgtggtcgctgcgctacccg
ctggtcgacggcaacggcaacttcggttcgcccggtaacgacccggccgccgcgatgagg
tactgcgttacggcagatgtccgtattcgtacttttgatggcagtgtccggatgggcgac
gtcgtgccggacgccgcgccgagcagcgagaccgacattgagctcaaggtccgcgatcgc
aacggcgacctggtccgcgcctcgaagttcttccactccggcgagcaccccacgctgcgg
ctgcgtacccgcgaggggtacgagctgaccggcacccacaaccacccggtgctctgtctg
gtgaacgtggccggcgtgccgaccctgctctggaagctgctcgccgaggtttcacgcggt
gaccgcgtggtcctccagcgcaccgtgccggacgagatcggctacccgatgctggagcac
gtcgaggcggccgtgcttgcgggtgcctacgtgagtgagggttggacctccggtgaccgg
gttggcttcgacaactgcgaccgggagttcttcgtccgggtcctcgccgcctacgacctc
gcggtcggcggtcggcgctgggtcggcaccgagacgaccgttactggtaagacgctgcac
aagctacggggatggatctccgattttgcgggatctgctcttggcgagctggtcggcgcg
cgtagcgccgccaagttcgtgccggagttcgtctggcgtgggccggccgcggtgaagcgg
gccttcctccaggcgctgttcgagggcgacggctcgtcgtcgctgctgccgcgccacacg
atccaggtctcgtactcgacccgcagtgagcgcctggcccgcgaggtgcagcagctcctg
ctggagttcggcgtcatcagccggcagtgccggtacgaggacggcgagatcaaggtcgtg
atcaccaaccggcgcgacgcgcggatcttcgccgcccacgtcgggttcctcggccgcaag
caggccaagctggagtcggagctggcctcggtgccggcgaccagcaccgcgctctccggc
gacatggtgccgttcgtcggtgacttcatccgggagcacggcgcgacgcgctggaccgag
cgcgactggctgcgtcggcacaacgtggaccgagtggaacggtgggagcgggaccgcgac
gagatcgccgcccggatcaccgagccggggatcctcgacgtggtcgagccgttggtcgac
ggccggttctactacgccgaggtgaccgaggtcaccgacgcgggggcccggccggtctac
agcatccgggtcgacaccgacgaccactccttcgtctccgacggtttcgtcagccacaac
accgagtgcaagctcgacccgctggccatggagatgctgcgggacatcgacgaggacacc
gtcgacctccaggacaactacgacggccgggccaaggagcccacgatcctgccgtcgcgg
atcccgaacctgctgatcaacggctccgagggcatcgcggtcggcatggccaccaagatc
ccgccgcacaacctgcgggagatcggcgcggcggtgcagtggtgcctggagaacccggag
gccgacgaggcgaccacgctggaagccctgctggagatcgtcaagggcccggacttcccg
acccacggcctgatcgtcgggcaacaggccatccaggacgcctaccggaccgggcgcggc
tcgatccggatgcgcgcggtggtcgaggtcgaggaggacaagcggggccggccggcgctg
gtggtcagcgagctgccctaccaggtcaacccggacaacctcgccgagcggatcgccgag
ctgatcaaggagggcaagctcgccggcatcgccgacatccgggacgagtcctccgggcgt
accggcatgcggatcgtgctggtgctcaagcgtgacgcggtcgccaaggtggtgctgaac
aacctctacaagcacacccagctccaggagacgttcggcgccaacatgctggcgctggtc
gacggggtgccgcgcacgctcaacctggcgcagttcatccgctactacgtcgagcaccag
atcgaggtcatccgccggcggaccgcgttccggctgcgcaaggcggaggagcgggcgcac
atcctgcggggcctgtccaaggcgttggacgccctggacgaggtgatcgcgctgatccgg
cgctcgcccaccgtggaggacgcgcggcagggcctgatccggctgctggagatcgacgag
gtccaggcgaccgcgatcctggacatgcagctacgccgcctggccgcgctggagcgtcag
cggatcctggacgacctggccaagctcgaggtggagatcgccgatctcaaggacatcctg
gccaagccggagcggcagcggaagatcgtctccgacgagctgggcgagatcgtcgccaag
tggggtgacgaccggcgcaccaagatcatcccgttcgacggcgaggtctcgatggaggac
cttatcgcccgcgaggacgtggtcgtgacgatcacccgcaccgggtacgcgaagcggacg
aaggtcgacctctaccggtcgcagcgccgtggcggcaagggcgtgagcggggcgacgctc
cggcaggacgacatcgtgagtcacttcttcgtatgctctacccacgactggatcctgttc
ttcacgaacaagggtcgggtctaccgggcgaaggcgtacgagcttcccgaggccagtagg
gtggccaagggccagcacgtggccaacctgctcgcgttccaaccggacgagcagatcgcg
cagatcatcgaaatcccgaactaccaggtggcgccctacctggtactggccacgaagaac
ggcctggtgaagaagacgcggctcgaggagttcgactccaaccgttccggcggcatcatc
gcggtcaacctgcgcgatgaggacgagctggtcggtgcggtcctggtggcgccggaggac
gacctgttgctggtttcgaagaacgcgcaggcgatccgcttcaacgccaccgacgaggcc
ctgcgtccgatgggccgcgccacctcgggggtgatcgggatgcgcttcagcggtgaggac
gagttgctcgccgtcgaggtcgtccgggaaggtctggacgttctggtcgcgacgaacggg
ggctacgcgaaacgtaccccgatcgaggaatacccggtccagggccggggaggtaaaggc
gtgttgactgccaagatcaccgagcgacggggtggtctggtcggcgcggccgtgatcgat
ccggaggacgagctgttcgccatcacgagcaacggcggcgtcatccggactccggtgaag
cctgtacgccgtacgcgtgaccggaacacaatgggggtcaagctgatggacctcccggac
ggcgtgactatcgtggcgattgctcgcaatgccgacgagcctgacgaacaggactag
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integrated database retrieval system
