Micromonospora robiginosa: H1D33_08495
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Entry
H1D33_08495 CDS
T09299
Name
(GenBank) pectate lyase
KO
K22539
pectate lyase [EC:
4.2.2.2
]
Organism
mfeu
Micromonospora robiginosa
Pathway
mfeu00040
Pentose and glucuronate interconversions
mfeu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mfeu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
H1D33_08495
Enzymes [BR:
mfeu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
H1D33_08495
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Motif
Pfam:
Pectate_lyase
F5_F8_type_C
PT
Motif
Other DBs
NCBI-ProteinID:
QLQ38852
UniProt:
A0A7L6BA46
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Position
complement(5116188..5117399)
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AA seq
403 aa
AA seq
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MRRKVATRWLTGGAAAVAGAVVALALHVPSASAATNLSLGAGADGSSKASGTSYGNVIDG
NAGTYWSPSGSTGTISVKWGSATTVSSAVIVPASGGGSISGWQLKNHDTGAVLASGGSAP
STINFSSTSLKKISLVITSASGTPRIAEFETYASGGSTPTSGPTGGPTGGPTSGPTGNPG
TPTGAWPSSTGSVSISSTVNVSGTFDGGMKTYCCMGDGGQGESQDPMFKIANGGTLQNVI
LGSPAGDGVHCEGTCTIRNVWWNDIGEDAATFKQTNGGTSYVIGGGARSGSDKTFQHNGN
GTVNISGFYLKGTGKLYRACGNCSTSYTRHVRIDNVLVDDIDMLAGINSNWNDTATITRV
VVIGSATICGKYKGVAKGSEPSYLGEGWNDANCKVNRSDVIFR
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgagacgtaaagtcgccacgcgctggctgaccggcggtgccgctgcggtcgcgggtgcc
gtcgtcgcgctggcgttgcacgttcccagcgcctcggccgccacgaacctcagcctcggt
gccggcgccgacggctccagcaaggccagtggcaccagctacggcaacgtcatcgacggc
aacgccggcacctactggtcgccgagtggctcgaccggcacgatctcggtcaagtggggc
agcgccaccacggtgtcctcggccgtcatcgtgcccgcctcgggcggcggctcgatcagc
ggctggcagctcaagaaccacgacacgggcgccgtcctggccagcggcggcagcgccccg
agcaccatcaacttctcctcgacgtcgctgaagaagatctccctcgtcatcaccagcgcg
tccggcaccccgcggatcgccgagttcgagacgtacgccagcggcgggtcgaccccgacc
agcggcccgaccggtggccccaccggcggtccgacgtccggcccgaccggcaacccgggc
acgccgaccggtgcgtggccgtcgtcgaccggctcggtgagcatctcgagcacggtcaac
gtctccggcaccttcgacggcgggatgaagacctactgctgcatgggtgacggtgggcag
ggcgagtcgcaggacccgatgttcaagatcgccaacggcggcaccctgcagaacgtcatc
ctcggttcgcccgcaggtgacggcgtgcactgcgagggcacctgcacgatccgcaacgtg
tggtggaacgacatcggtgaggacgccgccaccttcaagcagaccaacggcggcacgtcc
tacgtcatcggtggcggcgcgcgcagcggcagcgacaagaccttccagcacaacggcaac
ggcacggtcaacatctccggcttctatctcaaggggaccggcaagctgtaccgcgcctgc
ggcaactgctccacctcgtacacccgtcacgtgcgtatcgacaacgtcctcgtcgacgac
atcgacatgctcgccggcatcaacagcaactggaacgacaccgcgacgatcactcgtgtg
gtcgtgatcggctcggccaccatctgcggcaagtacaagggtgtggccaagggcagcgaa
cccagctacctcggtgagggctggaacgacgccaactgcaaggtcaaccgaagcgacgtc
atcttccggtag
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