Micromonospora robiginosa: H1D33_09265
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Entry
H1D33_09265 CDS
T09299
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
mfeu
Micromonospora robiginosa
Pathway
mfeu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mfeu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
H1D33_09265
09124 Replication and repair
03420 Nucleotide excision repair
H1D33_09265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfeu03021
]
H1D33_09265
03400 DNA repair and recombination proteins [BR:
mfeu03400
]
H1D33_09265
Enzymes [BR:
mfeu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H1D33_09265
Transcription machinery [BR:
mfeu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
H1D33_09265
DNA repair and recombination proteins [BR:
mfeu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
H1D33_09265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
Motif
Other DBs
NCBI-ProteinID:
QLQ38990
UniProt:
A0A7L6BBJ0
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All DBs
Position
4954890..4956569
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AA seq
559 aa
AA seq
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MSGGPLIVQSDKTLLLEIDHPDAQACRMAIAPFAELERSPEHVHTYRLTPLGLWNARAAG
HDAEGVVDSLIKYSRYPVPHGLLVDVAETMDRYGRLQLANDPAHGLVLRALDRVVLIEVA
KSKKLAGMLGAKLDDDTIAVHPSERGRLKQALLKLGWPAEDLAGYVDGEAHPIELAESGA
DGGKPWTLRSYQREAVEAFWAGGSGVVVLPCGAGKTLVGAAAMAEAKATTLILVTNTVAG
RQWKRELIARTSLTEEEIGEYSGERKEIRPVTIATYQVLTSRRGGAFTHLDLFGARDWGL
VVYDEVHLLPAPIFRFTADLQARRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEQ
QGWIAPAECTEVRVTLTDAERLAYATAEAEERYRMAATARTKLPVVRALVERHPAEQVLV
IGGFLDQLHQLGEYLDAPIVQGSTTNKERERLFDAFRSGEIRTLVISKVGNFSIDLPEAA
VAIQVSGTFGSRQEEAQRLGRVLRPKADGRQAHFYTVVSRDTIDTEYAAHRQRFLAEQGY
AYTIVDADDVLGPSLPSVD
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
gtgagcggtggaccactgatcgtgcagtcggacaagacgctgctgctggagatcgaccac
cccgacgcgcaggcgtgccggatggccatcgcgcccttcgccgagctggagcgctcgccc
gagcacgtgcacacctaccggctcaccccgctgggcctgtggaacgcgcgggccgccggg
cacgacgccgagggcgtggtcgactccctgatcaagtattcgcgctacccggtgccgcac
ggcctgctggtggacgtggccgagacgatggaccggtacggccgcctccagctcgccaac
gacccggcgcacgggctggtgctgcgcgccctggaccgggtggtgctgatcgaggtggcg
aagagcaagaagctcgccggcatgctcggcgcgaaactcgacgacgacacgatcgcggtg
cacccgtccgagcggggccggctcaagcaggcgctgctgaagctgggctggccggcggag
gacctggccggctacgtggacggcgaggcacacccgatcgagctggccgagtccggtgcg
gacggcggcaagccgtggacactgcggtcgtaccagcgggaggcggtggaggcgttctgg
gccggcgggtccggcgtggtggtgctgccctgcggcgccggaaagacgctggtcggcgcc
gcggcgatggcggaggcgaaggcgaccacgctgatcctggtgacgaacacggtcgccggc
cggcagtggaagcgggagctgatcgcccgcacgtcgctgaccgaggaggagatcggcgag
tactcgggcgagcgcaaggagatccgcccggtcaccatcgccacgtaccaggtgctcacc
tcgcggcgcggcggcgcgttcacccacctggacctgttcggcgcccgcgactggggcctg
gtcgtctacgacgaggtgcacctgctgcccgcgccgatcttccgcttcacggcggacctc
caggcccgccgccggctcggcctcaccgcgacgctggtacgcgaggacggccgcgagggc
gacgtgttcagcctgatcggcccgaagcggtacgacgcgccgtggaaggacatcgagcag
cagggctggatcgccccggccgagtgcaccgaggtacgggtgacgctgaccgacgcggag
cgactggcgtacgcgacggcggaggcggaggagcgctaccggatggcggcgaccgcccgc
accaagctgccggtggtccgcgcgctggtggaacgccaccctgccgagcaggtcctcgtc
atcggtggcttcctcgaccagttgcaccagctcggcgaatacctggacgctccgatcgtg
cagggttccaccacgaacaaggagcgggagcggctgttcgacgcgttccgctccggcgag
atccgcacgctggtgatctcgaaggtggggaacttctcgatcgacctgccggaggcggcg
gtggcgatccaggtgtccggcacgttcggctcgcggcaggaggaggcgcagcggctgggc
cgggtgctccggccgaaggccgacggccggcaggcgcacttctacacggtggtgtcccgg
gacacgatcgacaccgagtacgccgcgcaccggcagcgtttcctcgccgagcaggggtac
gcgtacaccatcgtggacgccgacgacgtcctcggcccttcgctgccgagcgtcgactga
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