KEGG   Micromonospora robiginosa: H1D33_14420
Entry
H1D33_14420       CDS       T09299                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
mfeu  Micromonospora robiginosa
Brite
KEGG Orthology (KO) [BR:mfeu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mfeu03400]
    H1D33_14420
Enzymes [BR:mfeu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     H1D33_14420
    5.6.2.6  RNA 3'-5' helicase
     H1D33_14420
DNA repair and recombination proteins [BR:mfeu03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    H1D33_14420
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH4_Lhr DEAD WH3_Lhr WH2_Lhr Helicase_C ResIII AAA_25 DUF6406
Other DBs
NCBI-ProteinID: QLQ39909
UniProt: A0A7L6BDA7
LinkDB
Position
3838491..3843209
AA seq 1572 aa
MADEVAPAGGVLAEFGAATRAWFTAAFAAPTPAQEGAWRSVAAGRNALVVAPTGSGKTLA
AFLWSLDRLGKEPPPADPRRRCRVLYVSPLKALAVDVERNLRTPLIGIRQAATRLDVAPP
DITVGMRTGDTPADERRAFARTPPDVLITTPESLFLLLTSAARDSLRGVDTVIVDEVHAV
AGTKRGAHLALSLERLDALLDRPAQRIGLSATVRPIDVCARFLGGAHPVDVVQPPADKTI
EVSVQVPVEDMTRLDEQEQPEDELGGLGPRRPSIWPAVEERVLGLIRAHRSTIVFTNSRR
GAERLCARLNELAAEEAEAATAAEAARMARGGEPVRVSDLLPDRDGPPAGDGGPGPTDLG
GRRGADAFGGPVGPVRAPRQPAEVMAQSGAAAGAPTVIARAHHGSVSREERKHIEEALKS
GQLPAVVATSSLELGIDMGAVDLVVQIEAPPSVAAGLQRVGRAGHQVGAVSRGVVFPKHR
GDLLSCTVVAERMGDGAIEELHYPRNPLDVLAQQIVAMVALEPWQLGDLAVLVRRAAPFA
ELPDSALHAVLDMLSGRYPSTAFAELRPRLVWDRATDVLTGRPGAQRLAVTSGGTIPDRG
LFGVFLAGAERAARVGELDEEMVYESRVGDVFLLGSSSWRIEEITPDRVLVSPAPGQAAR
MPFWKGDQLGRPVELGRAIGARVRALLRQSDDDAVAALRAGGLDDWAAGNLMTYLREQKA
ATRSLPDDRTVVVERFRDELGDWRLAVHSVLGARVNGPWALAIGRRLAERYGVDAQVMPS
DDGIVVRLPDTAEEPPGADVVVFEPDEIAQLVEESVGTSALFASRFRECAARSLLLPRRD
PRRRQPLWQQRQRAAQLLDVAREYADFPVTLEAARECLQDVFDQPALAELMRDLGARKVR
LVEVESERPSPFARSLLFGYVGAFLYEGDAPLAERRAAALALDSGLLGELLGRVDLRELL
DPAVLAETERQLRWRTEQRRPRDAEDVVELLRVVGDLSTAELAERGVPETWPEELAAARR
ALRVRIAGEERWIVVEDAARLRDALGVALPVGVAEAHLAPVADPLGDLVARYARTHGPFA
AATCAARFGLGVFVVEQALRRLAGTGRVVSGEFAPDSVGTQWCDAEVLRLLRRRSLAALR
REIEPVPPRALAAFLPRWQQVGSSARGVEAVAATVEQLQGVTVPASALERLVLPARVADY
SPAQLDELCASGEVVWAGAGAISGGDGWVTLAYADVAPLLLPPPDEALTLTPLHESVLDA
LADGQALFFRSLSDRVGATDDTALSGVVWDLVWAGHLTNDTLAPLRAALGAGGAHRSRPS
APRTRYRRPGRVALPSRGGPPTMAGRWSRLPERDLDPTRRAAALADLLLERHGVVTRGAV
VAEQVTGGFAGVYPVLSALEERGAARRGYFVEGLGAAQFAVPGAVDRIRALADPADGGRG
GGGPTVVLAATDPANPYGAALPWPERVVDSGDGAAPATGHRAGRKAGALVVLVGGDLVLY
VERGGRTILSFSEDADMLGAAGKALADAVHSGALGAISVERADGEAVRSSPLRDALTAAG
FRATPRGLRLRG
NT seq 4719 nt   +upstreamnt  +downstreamnt
gtggcggacgaggtggccccggcgggcggggtgctggcggagttcggcgcggcgacccgg
gcgtggttcaccgcggcgttcgccgcgcccacgccggcccaggagggcgcctggcgctcc
gtcgcggccgggcgcaacgccctggtggtcgccccgaccggctccggcaagaccctggcg
gcgttcctctggtcgctcgaccggctcggcaaggagccgccaccggccgatccccggcgg
cgctgccgggtgctctacgtcagcccgctcaaggccctcgccgtcgacgtggagcgcaac
ctgcgcaccccgctcatcggcatccgccaggccgccacccggctcgacgtcgccccgccc
gacatcacggtcggcatgcgcaccggcgacaccccggccgacgagcggcgggccttcgcc
cgcaccccgccggacgtcctcatcaccacgcccgagtcgctgttcctgctgctcacctcc
gccgcccgcgactcgctgcgcggggtggacacggtgatcgtcgacgaggtgcacgcggtc
gccggcaccaagcgcggcgcccacctggcgctctccctggaacgactcgacgcgctgctc
gaccgccccgcgcagcggatcgggctctccgccacggtgcggccgatcgacgtctgcgcc
cgcttcctcggtggcgcccacccggtcgacgtggtgcaaccgccggccgacaagaccatc
gaggtcagcgtccaggtcccggtggaggacatgacccgcctcgacgagcaggagcagccg
gaggacgagctgggcgggctcggcccgcgccggccgtcgatctggccggcggtcgaggaa
cgggtgctcgggttgatccgcgcgcatcggtccaccatcgtcttcaccaactcccggcgc
ggcgccgagcggctctgtgcccgcctcaacgagctggccgccgaggaggcggaggcggcg
accgcagcggaggccgcccgcatggcccggggcggggagccggtgcgcgtatccgatctc
ctacccgaccgcgacggcccgccggccggcgacggcggcccgggtccgacggacctgggc
gggcggcgcggcgcggacgcgttcggcgggccggtcgggccggtgcgcgcgccccggcag
ccggccgaggtgatggcccagtccggcgcggcggccggcgcgccgacggtgatcgcccgg
gcgcaccacggcagcgtctcccgggaggagcgcaaacacatcgaggaggcgctcaagtcc
ggccagttgcccgccgtggtcgccacctccagcctggagctgggcatcgacatgggcgcg
gtcgacctggtggtgcagatcgaggcgccgccgagcgtcgcggccgggctgcaacgggtg
ggccgggccgggcaccaggtgggcgcggtctcccggggcgtggtgttccccaagcaccgc
ggcgacctgctctcctgcaccgtggtcgccgagcggatgggcgacggcgcgatcgaggag
ctgcactatccacgcaacccgctcgacgtgctggcgcagcagatcgtcgccatggtggcg
ctggagccgtggcagctcggcgacctggccgtgctggtccgccgggcggcgcccttcgcc
gagctgcccgactcggcgctgcacgcggtgctcgacatgctctccggccgctacccgtcg
accgcgttcgccgagctgcgcccccggctggtctgggaccgcgcgaccgacgtgctgacc
ggccggcccggcgcccaacggctcgccgtgaccagcggcggcaccattcccgaccggggc
ctgttcggggtcttcctggccggggccgagcgggcggcccgggtcggcgagctggacgag
gagatggtctacgagtcccgcgtcggcgacgtgttcctgctcggctcgtcgtcctggcgg
atcgaggagatcacccccgaccgggtgctggtctcccccgcgcccggccaggccgcccgg
atgccgttctggaagggcgaccagctcggccgcccggtcgagctgggccgggcgatcggc
gcccgggtccgcgcgctgctgcgccagtccgacgacgacgcggtggcggcgctgcgggcc
ggtgggctggacgactgggccgccggcaacctgatgacctacctgcgcgagcagaaggcg
gccacccgctcgctgcccgacgaccggacggtggtggtcgagcggttccgcgacgagctg
ggcgactggcggctcgccgtgcactcggtgctcggcgcccgggtcaacgggccgtgggcg
ctggccatcggtcgccggctggccgagcgctacggcgtggacgcccaggtgatgccctcc
gacgacggcatcgtggtccggctgccggacaccgccgaggagccgcccggcgccgacgtg
gtggtgttcgagccggacgagatcgcccaactggtcgaggagtcggtcggcacgtcggcg
ttgttcgcctcccggttccgcgagtgcgcggcccggtcgctgctgctgccccgccgcgac
ccgcgccggcggcagccgctgtggcagcagcgccagcgcgccgcgcaactgctcgacgtg
gcccgcgagtacgccgacttcccggtcaccctggaggccgcacgggagtgcctgcaggac
gtcttcgaccagccggcgctggccgagctgatgcgtgacctgggcgcccgcaaggtccgc
ctggtcgaggtggagtccgagcgcccgtcgccgttcgcccggtcgctgctgttcggctac
gtcggcgcgttcctctacgagggcgacgcgccgctggccgagcggcgggccgccgcgctg
gcgctcgactccgggctgctcggcgagctgctcggccgggtcgacctgcgggagctgctc
gacccggcggtgctcgccgagaccgaacgccaactgcgctggcgcaccgagcagcggcgt
ccccgcgacgccgaggacgtggtcgagctgctccgggtggtcggtgacctgagcaccgcc
gagctggccgagcggggggtgccggagacctggccggaggagctggcggcggcccgccgg
gcgctgcgggtgcggatcgccggcgaggagcgctggatcgtcgtcgaggacgcggcccgg
ctgcgtgacgcgctcggcgtggcgcttccggtcggcgtggccgaggcgcacctcgccccg
gtggccgacccgctcggtgacctggtcgcccgttacgcccgcacccacggcccgttcgcg
gcggccacctgcgcggcccggttcggcctcggcgtgttcgtggtcgagcaggcgctgcgc
cggctcgccggcaccggccgggtggtgtccggcgagttcgccccggacagcgtgggcacc
cagtggtgcgacgcggaggtgctgcgcctgctgcgccgccgttccctggcggcgctgcgc
cgggagatcgagccggtgccgccccgggcgctggccgcgttcctgccccgctggcagcag
gtcggctcgtcggcccggggcgtcgaggcggtcgccgcgaccgtcgagcagttgcagggc
gtgaccgtgccggcgtccgcgctggaacgcctggtgctgcccgcccgggtcgccgactac
tcccccgcccagctcgacgagctgtgcgcgagcggcgaggtggtgtgggccggcgcgggc
gcgatctccggcggcgacgggtgggtgacgctggcgtacgccgacgtcgcgccgctgctg
ctgccgccgccggacgaggcgctgacgctcaccccgctgcacgagtcggtgctcgacgcg
ctcgccgacgggcaggcgctcttcttccgttcgctctccgaccgggtcggcgccaccgac
gacaccgccctgtccggcgtggtgtgggacctggtgtgggccggtcacctgaccaacgac
acgctcgccccgctgcgggcggcgctgggcgcgggtggggcgcaccggtcccgcccgtcg
gccccgcggacccgctaccgccggcccggccgggtggcgctgcccagccggggtggcccg
ccgaccatggccggccgctggtcccggctgcccgagcgcgacctcgacccgacccgtcgg
gccgccgccctggccgacctgctgctggaacggcacggcgtggtgacccggggcgcggtg
gtggccgagcaggtgaccggcggcttcgccggggtctacccggtgctgtccgcgctggag
gagcgcggggcggcccggcgcggctacttcgtcgaggggctgggcgcggcccagttcgcg
gtgcccggcgcggtggaccggatccgcgccctggccgacccggcggacggcggccggggc
ggtggcgggccgaccgtggtgctggccgccaccgacccggcgaacccgtacggcgcggcg
ctgccctggcccgagcgggtcgtcgactcgggtgacggcgcggccccggccaccggtcac
cgggccgggcgcaaggcgggcgcgctggtggtgctggtcggcggcgacctggtgctctac
gtcgagcggggcgggcggacgatcctgtcgttcagcgaggacgccgacatgctgggcgcg
gcggggaaggcgcttgccgacgcggtgcactccggcgcgttgggcgcgatctcggtggaa
cgcgccgacggcgaggcggtgcgctcgtcgccgctgcgcgacgcgctgaccgccgccggg
ttccgggccacccctcggggcctgcgcctgcgcggctga

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