KEGG   Micromonospora robiginosa: H1D33_14530
Entry
H1D33_14530       CDS       T09299                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
mfeu  Micromonospora robiginosa
Pathway
mfeu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mfeu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    H1D33_14530 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mfeu03019]
    H1D33_14530 (rny)
Messenger RNA biogenesis [BR:mfeu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     H1D33_14530 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 KH_KhpA-B FUT8_N_cat DUF6479
Other DBs
NCBI-ProteinID: QLQ39930
UniProt: A0A7L6BE42
LinkDB
Position
complement(3815445..3817211)
AA seq 588 aa
MSAFDVVLLVVVLLLVAVVVGAVLFGVRALKRFSLAPAPEDPAFIAEKDRQEQSLAALRT
AADEVNSTIDVAKSAASAARAEAAAAKAEAKAARAEARRVLDDARAEADTVLERAHKQAE
ADAEQLRATARRSGEREVAVLAATTREQAAEVERRAARMDERERLHTEEVERLAERERQL
TAATAALAAREAALVERERELTEVEEQRHRELERVAGLTADTARAELVESIEGQAKREAA
LLVREIEADARGSAEQRARNIVVDAIQRVASEQTAESVVSVLHLPGDEMKGRIIGREGRN
IRAFESVTGVNLIIDDTPEAVLLSCFDPVRREVGRVTLEKLVLDGRIHPHRIEEVYDLAR
QEVAELCHRAAEDALVEVGITEIHPELVTLLGRLRYRTSYGQNVLKHLVETAHIAGTMAA
ELRLDVPTIKRCAFLHDIGKALTHEVEGSHAIIGADLARKYGETEDVVHAIEAHHNEVPP
QTIEAVLTQASDACSGGRPGARRESLEAYVKRLERIEEIAAGKLGVEKVFAMQAGREIRV
MVKPDDVDDIGAAVLARDVAKQIEEELTYPGQIRVTVVRESRVTEIAR
NT seq 1767 nt   +upstreamnt  +downstreamnt
atgagcgccttcgacgtcgtcctcctcgtggtggtgctgctgctcgtcgcggtggtcgtc
ggcgccgtgctgttcggcgtgcgggcgctcaagcgcttcagcctggcccccgcgccggag
gacccggcgttcatcgcggagaaggaccggcaggagcagtccctggccgcgctgcgcacc
gccgccgacgaggtgaacagcaccatcgacgtggccaagtcggccgcctccgcggcccgg
gccgaggccgccgccgccaaggccgaggcgaaggccgcccgcgccgaggcgcgacgggtg
ctcgacgacgcccgcgccgaggccgacaccgtgctggaacgggcgcacaagcaggccgag
gcggacgccgagcagctccgcgccaccgcgcggcgcagcggcgagcgggaggtggcggtg
ctcgccgccaccacccgggagcaggccgccgaggtcgagcggcgggccgcccggatggac
gagcgggagcggctgcacaccgaggaggtggagcggctggccgagcgcgagcggcagctc
accgccgccaccgccgcgctcgccgcccgggaggccgcgctggtcgagcgcgagcgggag
ctgaccgaggtggaggagcagcgtcaccgcgaactggagcgggtggccgggctgaccgcc
gacacggcccgcgccgagctggtcgagtcgatcgaggggcaggccaagcgggaggccgcg
ctgctggtccgggagatcgaggcggacgcccggggcagcgccgagcagcgcgcccgcaac
atcgtggtggacgccatccagcgggtcgccagcgagcagaccgcggagagcgtggtcagc
gtcctgcacctgcccggcgacgagatgaagggacgcatcatcggccgggaggggcgcaac
atccgcgccttcgagtcggtcaccggcgtcaacctgatcatcgacgacacccccgaggcg
gtgctgctctcctgcttcgacccggtccgccgcgaggtcggccgggtcaccctggagaag
ctggtcctggacggccggatccacccgcaccggatcgaggaggtctacgacctggcccgc
caggaggtggcggagctgtgtcaccgggccgccgaggacgccctggtcgaggtgggtatc
accgagatccacccggaactggtcaccctgctgggccggctgcgctaccgcacgtcgtac
gggcagaacgtgctcaagcacctggtcgagaccgcgcacatcgccggcaccatggccgcg
gagctgcggctggacgtgccgaccatcaagcggtgcgcgttcctgcacgacatcggcaag
gcgctcacccacgaggtggagggcagccacgccatcatcggcgccgacctggcccgcaag
tacggcgagaccgaggacgtggtgcacgccatcgaggcgcaccacaacgaggtgccgccg
cagaccatcgaggcggtcctgacccaggcgtccgacgcctgctcgggcgggcggcccggg
gcccggcgggagagcctggaggcgtacgtcaagcggctggagcggatcgaggagatcgcg
gccggcaagctcggcgtggagaaggtcttcgccatgcaggcgggccgggagatccgggtg
atggtgaagccggacgacgtggacgacatcggcgcggcggtgctggcccgggacgtggcc
aagcagatcgaggaggagctgacctatccggggcagatccgggtgaccgtggtgcgcgag
tcccgggtcaccgagatcgcccgctga

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