Micromonospora robiginosa: H1D33_14530
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Entry
H1D33_14530 CDS
T09299
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
mfeu
Micromonospora robiginosa
Pathway
mfeu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfeu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H1D33_14530 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfeu03019
]
H1D33_14530 (rny)
Messenger RNA biogenesis [BR:
mfeu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
H1D33_14530 (rny)
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_KhpA-B
FUT8_N_cat
DUF6479
Motif
Other DBs
NCBI-ProteinID:
QLQ39930
UniProt:
A0A7L6BE42
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Position
complement(3815445..3817211)
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AA seq
588 aa
AA seq
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MSAFDVVLLVVVLLLVAVVVGAVLFGVRALKRFSLAPAPEDPAFIAEKDRQEQSLAALRT
AADEVNSTIDVAKSAASAARAEAAAAKAEAKAARAEARRVLDDARAEADTVLERAHKQAE
ADAEQLRATARRSGEREVAVLAATTREQAAEVERRAARMDERERLHTEEVERLAERERQL
TAATAALAAREAALVERERELTEVEEQRHRELERVAGLTADTARAELVESIEGQAKREAA
LLVREIEADARGSAEQRARNIVVDAIQRVASEQTAESVVSVLHLPGDEMKGRIIGREGRN
IRAFESVTGVNLIIDDTPEAVLLSCFDPVRREVGRVTLEKLVLDGRIHPHRIEEVYDLAR
QEVAELCHRAAEDALVEVGITEIHPELVTLLGRLRYRTSYGQNVLKHLVETAHIAGTMAA
ELRLDVPTIKRCAFLHDIGKALTHEVEGSHAIIGADLARKYGETEDVVHAIEAHHNEVPP
QTIEAVLTQASDACSGGRPGARRESLEAYVKRLERIEEIAAGKLGVEKVFAMQAGREIRV
MVKPDDVDDIGAAVLARDVAKQIEEELTYPGQIRVTVVRESRVTEIAR
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccttcgacgtcgtcctcctcgtggtggtgctgctgctcgtcgcggtggtcgtc
ggcgccgtgctgttcggcgtgcgggcgctcaagcgcttcagcctggcccccgcgccggag
gacccggcgttcatcgcggagaaggaccggcaggagcagtccctggccgcgctgcgcacc
gccgccgacgaggtgaacagcaccatcgacgtggccaagtcggccgcctccgcggcccgg
gccgaggccgccgccgccaaggccgaggcgaaggccgcccgcgccgaggcgcgacgggtg
ctcgacgacgcccgcgccgaggccgacaccgtgctggaacgggcgcacaagcaggccgag
gcggacgccgagcagctccgcgccaccgcgcggcgcagcggcgagcgggaggtggcggtg
ctcgccgccaccacccgggagcaggccgccgaggtcgagcggcgggccgcccggatggac
gagcgggagcggctgcacaccgaggaggtggagcggctggccgagcgcgagcggcagctc
accgccgccaccgccgcgctcgccgcccgggaggccgcgctggtcgagcgcgagcgggag
ctgaccgaggtggaggagcagcgtcaccgcgaactggagcgggtggccgggctgaccgcc
gacacggcccgcgccgagctggtcgagtcgatcgaggggcaggccaagcgggaggccgcg
ctgctggtccgggagatcgaggcggacgcccggggcagcgccgagcagcgcgcccgcaac
atcgtggtggacgccatccagcgggtcgccagcgagcagaccgcggagagcgtggtcagc
gtcctgcacctgcccggcgacgagatgaagggacgcatcatcggccgggaggggcgcaac
atccgcgccttcgagtcggtcaccggcgtcaacctgatcatcgacgacacccccgaggcg
gtgctgctctcctgcttcgacccggtccgccgcgaggtcggccgggtcaccctggagaag
ctggtcctggacggccggatccacccgcaccggatcgaggaggtctacgacctggcccgc
caggaggtggcggagctgtgtcaccgggccgccgaggacgccctggtcgaggtgggtatc
accgagatccacccggaactggtcaccctgctgggccggctgcgctaccgcacgtcgtac
gggcagaacgtgctcaagcacctggtcgagaccgcgcacatcgccggcaccatggccgcg
gagctgcggctggacgtgccgaccatcaagcggtgcgcgttcctgcacgacatcggcaag
gcgctcacccacgaggtggagggcagccacgccatcatcggcgccgacctggcccgcaag
tacggcgagaccgaggacgtggtgcacgccatcgaggcgcaccacaacgaggtgccgccg
cagaccatcgaggcggtcctgacccaggcgtccgacgcctgctcgggcgggcggcccggg
gcccggcgggagagcctggaggcgtacgtcaagcggctggagcggatcgaggagatcgcg
gccggcaagctcggcgtggagaaggtcttcgccatgcaggcgggccgggagatccgggtg
atggtgaagccggacgacgtggacgacatcggcgcggcggtgctggcccgggacgtggcc
aagcagatcgaggaggagctgacctatccggggcagatccgggtgaccgtggtgcgcgag
tcccgggtcaccgagatcgcccgctga
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