Micromonospora robiginosa: H1D33_17170
Help
Entry
H1D33_17170 CDS
T09299
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mfeu
Micromonospora robiginosa
Brite
KEGG Orthology (KO) [BR:
mfeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfeu03032
]
H1D33_17170
03400 DNA repair and recombination proteins [BR:
mfeu03400
]
H1D33_17170
Enzymes [BR:
mfeu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
H1D33_17170
DNA replication proteins [BR:
mfeu03032
]
Prokaryotic type
DNA Topoisomerases
H1D33_17170
DNA repair and recombination proteins [BR:
mfeu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H1D33_17170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Glyco_hydro_19
Motif
Other DBs
NCBI-ProteinID:
QLQ35150
UniProt:
A0A7L6B0J5
LinkDB
All DBs
Position
complement(3224861..3225850)
Genome browser
AA seq
329 aa
AA seq
DB search
MRLRRSDPGRPGYARRRRGKGWLFLDARGEPVRDPDELARLRELVVPPAWRDVWISPYPN
GHIQATGVDAAGRKQYVYHPQWRRKRDEAKFDHVLEVAHRLPALRDRVAHDLALRGLRRE
RVLATVARLLDMGAFRVGSDQYATGDDPTFGVATLRPEHARSRGGCVVFDFPAKGGIAQV
RRIEDAELCQVLVNLRRRRRAQERLFGYWDGRAWRDVRSDEVNDYLRDASGGEMTAKDFR
TWHATVLAAAELASVGPQRSATARRRAVAAVMRSVAELLGNTPTVARTSYVDPRVVDLYH
DGVLAPVRPEMPREAVEKFVLTLLEEEAD
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
gtgcggttgcggcgtagtgacccgggccggccggggtacgcccgccggcgacgcggcaag
ggctggctcttcctggacgcgcggggcgagccggtccgtgacccggacgagctggcgcgc
ctgcgcgagctggtcgtcccgcccgcctggcgggacgtgtggatctcgccgtacccgaac
gggcacatccaggccaccggcgtcgacgcggccgggcgcaagcagtacgtctaccacccg
cagtggcgccgcaagcgcgacgaggccaagttcgaccacgtgctggaggtggcgcaccgg
ctgccggcgctgcgcgaccgggtggcgcacgacctggcgctgcgcgggctgcgccgggag
cgggtgctggccaccgtggcgcggctgctcgacatgggcgcgttccgggtcggcagcgac
cagtacgccaccggcgacgaccccaccttcggggtggccacgctgcgccccgagcacgcc
cggtcgcgcggcgggtgcgtggtcttcgatttcccggccaagggtggcatcgcgcaggtg
cgccggatcgaggacgccgagctgtgccaggtgctggtgaacctgcgccggcggcggcgc
gcgcaggagcggctgttcggctactgggacgggcgggcctggcgcgacgtgcgcagcgac
gaggtgaacgactacctgcgcgacgccagcggcggggagatgaccgcgaaggacttccgc
acctggcacgccaccgtgctggcggccgcggagctggcctcggtcggcccgcagcgctcc
gccaccgcccgccggcgggccgtggcggcggtgatgcgctcggtggccgaactgctcggc
aacacgcccacggtggcccggacgtcctacgtggacccgcgcgtggtcgacctctaccac
gacggggtgctggcgccggtgcgcccggagatgccgcgcgaggcggtggagaagttcgtg
ttgacgctgctggaggaggaggccgactga
DBGET
integrated database retrieval system
