Micromonospora robiginosa: H1D33_17395
Help
Entry
H1D33_17395 CDS
T09299
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mfeu
Micromonospora robiginosa
Pathway
mfeu03030
DNA replication
mfeu03430
Mismatch repair
mfeu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mfeu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H1D33_17395 (dnaE)
03430 Mismatch repair
H1D33_17395 (dnaE)
03440 Homologous recombination
H1D33_17395 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfeu03032
]
H1D33_17395 (dnaE)
03400 DNA repair and recombination proteins [BR:
mfeu03400
]
H1D33_17395 (dnaE)
Enzymes [BR:
mfeu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H1D33_17395 (dnaE)
DNA replication proteins [BR:
mfeu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H1D33_17395 (dnaE)
DNA repair and recombination proteins [BR:
mfeu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H1D33_17395 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QLQ35189
UniProt:
A0A7L6AZN5
LinkDB
All DBs
Position
complement(3180739..3184272)
Genome browser
AA seq
1177 aa
AA seq
DB search
MGDSFAHLHVHTEYSMLDGAARLKDLFAEAARLGMPAVAITDHGNMHGANDFYKQAMAAG
VKPILGVEAYVAPESRFHKARVKWGRPEQKSDDVSGNGAITHMTMWAANRTGLHNMFRLN
SRASMEGHYVKWPRMDMELIAEHAEGIMATTGCPSGAVQTRLRLGQFDEALKVAAAYQDI
FGKDNYFLEIMDHGLDIERRVRDGLTEIARKLDIPPVVTNDSHYTHEAQAEAHDVLLCVQ
TGSNVADPNRFRFEGGGYFVKSADQMRAVDSSELWQQGCRNTLLVAEKVDPAGMFTFHNL
MPRFPIPEGETEESWFRKETFVGLKRRFPNGIPEGHVVQAEYELGVIIQMGFPSYFLVVA
DFIQWAKSQGIAVGPGRGSAAGSLVAYALGITDLDPIPHGLIFERFLNPERVSMPDVDID
FDERRRGEVIKYVTDKWGEDKVAQIATFGTIKAKAAIKDSARVLGFPYAVGDRITKAMPP
AVMGKDIPLSGIFDPKHPRYAEAGEIRGLYESDPDVKKVIETAKGIEGLIRQTGVHAAGV
IMSAEPIIEHIPLMRRDADGVIITQFDYPTCESLGLLKMDFLGLRNLTIIDDAVKNIQLN
HGKELDLLGLPLDDKAAYELLARGDTLGVFQLDGGPMRSLLRMMKPDNFEDISAVLALYR
PGPMGVDSHTNYALRKNGLQEITPIHPALEEPLREILAPTHGLIVYQEQVQRAAQILAGY
TLGQADLLRRAMGKKKKEILDKEFVPFRDGCRANGYPDDAIQAVWDVLVPFAGYAFNKAH
SAAYGLVSYWTAYLKAHYPAEYMAALLTSVGDDKDKMALYLSECRRMRIQVLPPDVNTSA
GPFTPVGKEIRFGLGAVRNVGANVVASIMRCREEKGEYADFYDFLSKVDAVACNKKTIES
LIKAGAFDSLNHARKGLLAVHADAIDAYADVKRKEAVGQYDLFGAGFGDADVGGSTTVMP
VIGDGEWDKRDKLAFEREMLGLYVSDHPLFGLEHVLGAAADTTIAALSEEGTVPDGAVVT
LAGILSGVQRRVTKQGRAWASATLEDLAGGVETLFFPNTYEVIGQYIAEDAIVVVKGRVD
RRDDTPRIMAMDMSMPDVTSNPANKPVTLTIPVHRCTPPLVERLKETLVLHPGDTEVHVK
LLNGGKVTTLRLGPFRVAATTALMGDLKSVLGPANVS
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgggcgattcgttcgcgcatctgcacgtacacaccgagtactcgatgctcgacggtgcg
gcccggctcaaggacctcttcgccgaggcggcgcggctcggcatgccggcggtcgcgatc
accgaccacggcaacatgcacggcgcgaacgacttctacaagcaggccatggccgccggg
gtcaagccgatcctcggcgtcgaggcgtacgtcgcgccggagtcgcgcttccacaaggcc
cgggtcaagtgggggcgccccgagcagaagagcgacgacgtctccggcaacggcgccatc
acccacatgaccatgtgggcggcgaaccgcaccggcctgcacaacatgttccggcttaac
tcccgggcgtcgatggagggccactacgtcaagtggccccggatggacatggagctgatc
gccgagcacgccgagggcatcatggccaccaccggctgcccgtccggcgcggtgcagacc
aggctgcggctcggccagttcgacgaggcgctcaaggtcgccgccgcctaccaggacatc
ttcggcaaggacaactacttcctggagatcatggaccacggcctcgacatcgagcgccgg
gtccgcgacgggctcaccgagatcgcccgcaagctcgacatcccgccggtcgtcaccaac
gactcgcactacacccacgaggcgcaggccgaggcgcacgacgtgctgctctgcgtacag
accggcagcaacgtcgccgaccccaaccggttccgcttcgagggcggcggctacttcgtc
aagtccgccgaccagatgcgcgcggtcgactcctccgagctgtggcagcagggctgccgc
aacacgctgctggtggcggagaaggtcgacccggccgggatgttcaccttccacaacctg
atgccgcggttcccgatccccgagggcgagaccgaggagtcctggttccgcaaggagacg
ttcgtcgggctcaagcgccgcttcccgaacggcatcccggagggccacgtcgtccaggcg
gagtacgagctgggcgtcatcatccagatgggcttcccgtcctacttcctcgtggtcgcc
gacttcatccagtgggcgaagagccagggcatcgcggtcggcccgggccgtggctcggcg
gccggctcgctggtcgcgtacgcgttgggcatcaccgacctcgacccgatcccgcacggg
ctgatcttcgagcggttcctcaaccccgagcgcgtctcgatgcccgatgtcgacatcgac
ttcgacgagcgccggcgcggcgaggtcatcaagtacgtgaccgacaagtggggcgaggac
aaggtcgcgcagatcgccacgttcggcacgatcaaggcgaaggccgcgatcaaggactcg
gcccgggtgctgggcttcccgtacgcggtcggcgaccggatcaccaaggccatgcccccg
gccgtgatgggcaaggacatcccgctgtcgggcatcttcgacccgaagcacccgcgctac
gccgaggccggcgagatccgcggcctctacgagtccgacccggacgtcaagaaggtcatc
gagaccgcgaagggcatcgaggggctgatccggcagaccggtgtgcacgcggccggcgtc
atcatgtccgccgagccgatcatcgagcacatcccgctgatgcgacgcgacgccgacggc
gtcatcatcacgcagttcgactacccgacgtgcgagtcgctcgggctgctgaagatggac
ttcctcggcctgcgcaacctgaccatcatcgacgacgcggtgaagaacatccagctcaac
cacggcaaggagctggacctgcttggcctgccgctggacgacaaggccgcgtacgagctg
ctcgcccgcggcgacacgctgggcgtgttccagctcgacggcggcccgatgcgctcgctg
ctgcggatgatgaagccggacaacttcgaggacatctccgccgtgctggcgctctaccgg
cccggcccgatgggcgtggactcacacaccaactacgcgctgcgcaagaacggcctccag
gagatcaccccgatccacccggcgctggaggagccgctgcgcgagatcctcgcccccacc
cacggcctgatcgtctaccaggagcaggtgcagcgcgccgcgcagatcctcgccggctac
acgctcggccaggccgacctgctgcgccgcgcgatgggcaagaagaagaaggagatcctg
gacaaggagttcgtcccgttccgggacggctgccgcgcgaacggctatcccgacgacgcc
atccaggcggtgtgggacgtcctggtgccgttcgccggctacgccttcaacaaggcgcac
tccgccgcgtacggcctggtgtcgtactggaccgcctacctcaaggcgcactacccggcg
gaatacatggcggcgctgctcacctcggtcggcgacgacaaggacaagatggcgctctac
ctgtccgagtgccgccggatgcggatccaggtcctgccgccggacgtgaacacctccgcc
gggccgttcaccccggtcggcaaggagatccggttcggtctcggcgcggtccgcaacgtc
ggcgcgaacgtggtcgcgtcgatcatgcgctgccgcgaggagaagggcgagtacgccgac
ttctacgacttcctgtccaaggtggacgcggtcgcctgcaacaagaagaccatcgaatcg
ctgatcaaggcgggcgcgttcgactcgctgaaccacgcgcgcaagggcctgctggccgtg
cacgccgacgccatcgacgcgtacgccgacgtcaagcgcaaggaggcggtcggccagtac
gacctcttcggcgccggcttcggcgacgccgacgtcggcggcagcaccacggtcatgccg
gtcatcggcgacggggagtgggacaagcgcgacaagctggcgttcgagcgggagatgctc
ggcctgtacgtctccgaccacccgctgttcggcctggaacacgtgctcggcgcggcggcc
gacaccaccatcgccgcgctctccgaggagggcacggtgcccgacggcgcggtcgtcacg
ctggccggcatcctctccggggtgcagcgccgggtcaccaagcagggccgggcgtgggcc
tcggccaccctggaggacctggccggcggcgtggagacgctgttcttccccaacacctac
gaggtgatcgggcagtacatcgccgaggacgccatcgtggtggtcaagggccgggtggac
cggcgcgacgacaccccccggatcatggcgatggacatgtccatgccggacgtcaccagc
aacccggccaacaagccggtcacgctgaccatcccggtgcaccgctgcaccccgccgctg
gtcgagcggctcaaggagaccctggtgctgcaccccggcgacaccgaggtgcacgtcaag
ctgctcaacggcggcaaggtcaccacgctgcgcctcggcccgttccgggtggccgcgacc
accgcgctgatgggcgacctgaagagcgtcctgggtccggccaacgtgagctga
DBGET
integrated database retrieval system
