Micromonospora robiginosa: H1D33_20135
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Entry
H1D33_20135 CDS
T09299
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mfeu
Micromonospora robiginosa
Pathway
mfeu00040
Pentose and glucuronate interconversions
mfeu01100
Metabolic pathways
mfeu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mfeu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
H1D33_20135
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
H1D33_20135
Enzymes [BR:
mfeu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
H1D33_20135
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
F5_F8_type_C
Motif
Other DBs
NCBI-ProteinID:
QLQ35671
UniProt:
A0A7L6B1H4
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Position
complement(2576752..2578317)
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AA seq
521 aa
AA seq
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MRRTVVLRLQATLATAVVGVAVAVAMPTPQASAAAGTATGYATQNGGTTGGAGGQTVRAT
TGTAIHTALCNRASSSTPIIIEVSGTINHGNTAKVSGSSCNTAAGVIELKQISNVTIIGV
GGGAVFDQLGIHIRDSRNIIIQNVTVRNVKKSGSPTSNGGDAIGMESTVRNIWVDHVTLE
ASGGEAEGFDGLFDMKDDTQYVTLSYSILRNSGRGGLIGSSESDRSNGFVTFDHNLYENI
DSRTPLLRGGVAHMYNNHYTGLHESGINSRAGARAKVENNYFRNSKDVLGTFYTNERGTW
QVAGNIFDNVTWSAAGNENYPAGPNPTSTTTVSIPYSYRLDGASCVPDIVRQTAGANTGL
RVSDGNCTPQSPPPTTPAPTTPAPTTPPPTTTSPPPPSGTNLSLASGAGADGSSKADGTS
YGNVRDGNLGTYWSPSGATGTISIKWGSATTVSRVVIREPSGTQGSIGSWQLVNNDTGAV
LASGTGAGAVSFAATSLKKINFKINSSNGTPKVGEFETYSG
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgagacgaacagtcgtgctgcgacttcaggccacgttggccacggcggtggtgggggtc
gcggtcgccgtggccatgccgacgccgcaggcgtcggcggcggccgggaccgccaccggc
tacgcgacccagaacggcgggaccaccggcggtgcgggcgggcagacggtacgcgccacc
accgggaccgcgatccacacggcactgtgcaaccgggccagcagcagcaccccgatcatc
atcgaggtctccgggaccatcaaccacgggaacaccgccaaggtgtccggttcgagctgc
aacaccgcggcgggcgtgatcgagctgaagcagatcagcaacgtcaccatcatcggggtg
ggcggcggcgcggtcttcgaccaactcggcatccacatccgcgactcgcgcaacatcatc
atccagaacgtcacggtgcggaacgtgaagaagtcgggctcgcccacctccaacggcggc
gacgccatcggcatggagagcaccgtccgcaacatctgggtcgaccacgtcacgctggag
gcgtccggtggcgaggcggagggcttcgacggcctgttcgacatgaaggacgacacccag
tacgtgacgttgtcctacagcatcctgcgcaactccggccggggcggtctgatcggctcc
agcgagagcgaccgctcgaacggcttcgtcacgttcgaccacaacctctacgagaacatc
gactcccgtacgccgctgctgcgcggcggcgtcgcccacatgtacaacaaccactacacc
ggcctgcacgagtccggcatcaactcccgcgccggcgcccgggccaaggtggagaacaac
tacttccgtaactccaaggacgtgctcggcacgttctacaccaacgagcgcggcacctgg
caggtcgccggcaacatcttcgacaacgtgacctggtcggccgccggcaacgagaactac
ccggccgggccgaacccgacgtccaccaccacggtcagcatcccctactcgtaccggctg
gacggcgcgagctgcgtaccggacatcgtccggcagacggcgggcgccaacaccgggctg
cgggtgtcggacggcaactgcacgccgcagtccccgccgcccaccacgcccgcgccgacc
acccccgcgccgaccaccccgccgccgacgaccaccagcccgccgccgcccagcggcacc
aacctgagcctcgcctccggcgccggcgccgacggttccagcaaggctgacggcaccagc
tacggcaacgtgcgcgacggcaacctgggcacgtactggtcaccgtccggggccaccggc
actatctcgatcaagtggggttcggccaccacggtctcgcgggtggtcatccgcgagccg
tccggcacccagggctcgatcggctcgtggcagctcgtcaacaacgacaccggggccgtg
ctggcctccgggaccggggcgggcgccgtcagtttcgcggccacctcactgaagaagatc
aacttcaagatcaacagctcgaacggtacgcccaaggtcggcgagttcgagacgtacagc
ggctga
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