Micromonospora ferruginea: H1D33_22425
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Entry
H1D33_22425 CDS
T09299
Name
(GenBank) TIR domain-containing protein
Organism
mfeu
Micromonospora ferruginea
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
TIR_2
Pentapeptide
NBCH_WD40
Ge1_WD40
WDR54
RMC1_N
NACHT
PROPPIN
Pentapeptide_4
AAA_22
WD40_like
AAA_16
Pentapeptide_3
TIR
BrxC_BrxD
Motif
Other DBs
NCBI-ProteinID:
WMF04510
LinkDB
All DBs
Position
1934863..1940643
Genome browser
AA seq
1926 aa
AA seq
DB search
MAVGAHPTRSDRPIDFFISYSPADERWATWLAWEFEAAGYRTLLQAWDFVAGTNFIDFMD
RGVREAEVVVAVLSERYLHSTYGKLEWQAALRADPDGTGNKLVTVRVEDCPIDGLLATIT
YVDLVGVDDPAQARARVLNRIRETLDGRAKPMRQPVFPLHLDDPADVLGAPVAGAPAQRR
PRRTPINPPPFPPAATAPPTARDTVTVLQVGGPRFGRGVIEPGAPVTPGELQEHLMGDLT
LLMNDGVPRPDLLVVAGNLTESGSPREFSDALSFLTGLRVLLGLEPHRLVVVPGPRDVTM
AACRAYFATCEADDVDPQPPYWPKWRHYARLFDDLFQGLEDRIFDSEQPWTLFGVPDLRV
VVAGLNSTIAITHREEDRYGFLGEAQSSWFAQRLRHYQQSGWLRLGAMAHAPGPRSPYAD
EAPPDRVSLRDRGSVNRLVGPMLNLLLSDAAPAGRADPVVPLAAAPRDGRAQVLRLGGDG
MTRWVLGRDDRLDVGESTAVAWPRADATFGASGPAQVPDPRRPAVVEGATQGEAAVAAGT
PVAPVERLLDRLAEVCEARYDRVVVRRVEADPPHLYVSYRSDGVVRQQRVGAHVGTPGPD
DVDRFARRVHATDPDIASELVYDGDRVPRGLAEEAQRRGVRVLHLTEFQGLLDLRDYVAA
QTARLQADRLYPPGQYVPQRYRHLVGADQRVREDVVDELLETVSAPDGRFVLVLGDFGRG
KTFALREVARRLPTAAPDLIPILVELRALDKAHSVDGLVAAHLANHGEQVIDLKAFRYML
RQGRIVLLFDGFDELVARVTYDRAADHLETLLQAAEGAAKIVVSSRTQHFKTNSQVLTAL
GERVGLLPHRRVLAVEDFTPGQIETFLRNRYGGDEQAARERMSLLGGVKDLLGLSRNPRM
LGFIANLDEGRLAAVAGAGGTFSAAALYREILESWLDFEERRTQGIPGAPVSLRRPEMWQ
AVSRLAFQLWESGESYLRLAELAESTGQLAGRADSRLSGPQATHAVGAGSLLVRTDDGLF
GFIHTSVMEWLVAEGVADQLNRGEEPAALAVRSLSALAVEFLGDLADPARCTAWTARVLG
DESAGETLRANALRLSARLRLPDRADLRGAVLRGEDLSHRELAGADLTGADLTDTRLVAT
NLTEARLEHARLRGARLDQARLAGADLRDAELAGARLFRADLRGARITGSSWHRTALIDV
SADPTLLRAPELRGAVVAPGRPVAPGLAPPAVGVGYGFEVGRLPVPVAYSPDGAVLAVGS
DDGGVLLCDTATGLPVRTLQGHRSRVYAVRYDDASHQLVTGAADLTVRLWDADHGDVRHV
IEDVFAGWVWPLLTDGRRGRLVVGDAAGVVRLFDTRTARLRHEWPGHDAPIWGTSFSPDG
RRVVVADSAGTVRGWDIHTGRLAFEVREPEVVYRVVHSPDGRLLAAVGQHGRVWIRRATD
GELLRQPRGHEADVYALDIHPDGTLMATGDTHGALRLWETETGRPVRVLGRQRGAIYSVR
FNGDGSLLATAASDGAIQLWDTDDGQLRHELTRHRGSVWPVVWRPDQNQVATSSNDGTTR
LWDVRTGQLQQTLRGHGRRVTALSFRDDGEVLAACGNDGVIRLWEPRTGRLLRQLASPAD
RLLSVVFCPDEPLVAAPSGDGGVHLWNTDTGADERELNVDTDHVWAVAFSPDGDALATAN
DDDTVRLWYRRTGRHFATLTPHRGRVRTVAFSPDGETIATGCDDQMVRLWDAATATCRLT
LEHHTDRVYSVGFNSEGTLLASAGNDGTAAIWDVATGERRAVLTEHVGRLWSCAFSPDGN
LLATAGDDLVIRLWDPVTGRRHGTLAAHTRRVWSVHFSPDSSLLASAGDDGTVRLWDVAD
PEHAQLRTTLIGLPDGWAAVSPDGRYKLDGDPGGQFWHVIGTCRFEVGELDPYLTQVRRL
AVDAPF
NT seq
5781 nt
NT seq
+upstream
nt +downstream
nt
gtggctgtaggcgcgcaccccacccggtccgaccgccccatcgacttcttcatcagctac
tcgcccgccgacgaacggtgggcgacgtggctggcgtgggagttcgaggccgccggctac
cgcaccctgctgcaggcgtgggacttcgtcgccggcaccaacttcatcgacttcatggac
cgcggggtccgcgaggccgaggtggtggtggcggtgctgtccgaacgctacctgcactcg
acgtacggcaagctggagtggcaggcggcgctgcgcgccgaccccgacggcaccggcaac
aagctggtcaccgtgcgggtggaggactgcccgatcgacggcctgctcgccaccatcacc
tacgtcgacctggtcggtgtggacgatcccgcccaggcgcgcgcccgggtgctcaaccgg
atccgggagaccctcgacggccgggccaagccgatgcgccagccggtgttcccgctgcac
ctcgacgaccccgccgacgtgctgggcgcgcccgtcgccggcgcgcccgcgcagcgccgc
ccccggcgtaccccgatcaacccgccgccgttcccgcccgccgcgaccgcgccgccgacg
gcccgcgacacggtcaccgtgctccaggtcggcgggccccgcttcggtcggggcgtgatc
gagcccggcgccccggtcacccccggcgagctgcaggagcacctgatgggtgacctgacg
ctgctgatgaacgacggggtgccccggccggacctgctggtggtggccggcaacctgacc
gagtcgggcagcccgcgcgagttctccgacgcgctgagcttcctcaccgggctgcgggtg
ctgctcggcctggagccgcaccgcctggtcgtggtgcccggcccgcgcgacgtgacgatg
gccgcctgccgggcctacttcgccacctgcgaggccgacgacgtggacccgcagccgccc
tactggccgaagtggcggcactacgcgcgcctcttcgacgacctgttccagggcctggag
gaccggatcttcgacagcgagcagccgtggaccctgttcggcgtgcccgacctgcgggtg
gtggtggccgggctgaactccaccatcgccatcacccaccgcgaggaggaccgctacggc
ttcctcggcgaggcgcagtcgagctggttcgcccagcggctgcgccactaccagcagtcc
ggctggctgcggctgggcgcgatggcgcacgcgcccggcccgcgcagcccgtacgccgac
gaggccccgccggaccgggtgtcgctgcgcgaccgcggctcggtcaaccggctggtcggc
ccgatgctcaacctgctgctctccgacgccgcgccggccggccgggccgacccggtggtg
ccgctggccgccgccccgcgcgacggccgggcccaggtgctgcgcctcggcggggacggg
atgacccgctgggtgctcggccgcgacgaccgcctcgacgtcggcgagtcgaccgcggtg
gcgtggccccgcgccgacgcgacgttcggcgcgtccggcccggcgcaggtgcccgacccg
cgccgtcccgccgtggtcgagggcgccacccagggcgaggccgcggtcgccgccggcacg
ccggtggcgccggtggagcggctgctcgaccggctcgccgaggtgtgcgaggcccgctac
gaccgggtggtggtgcgccgggtggaggccgacccgccgcacctctacgtcagctaccgc
tccgacggggtggtccggcagcagcgggtcggcgcgcacgtgggcacgcccggtccggac
gacgtggaccggttcgcccgccgggtgcacgccaccgacccggacatcgcctccgagctg
gtctacgacggcgaccgggtgccgcgcgggctggccgaggaggcgcagcggcgcggcgtg
cgggtgctgcacctgaccgagttccagggcctgctcgacctgcgcgactacgtcgccgcg
cagaccgcccggctgcaggccgaccggctctacccacccgggcagtacgtgccgcagcgc
taccggcacctggtcggcgccgaccagcgggtccgcgaggacgtggtggacgagctgctg
gagaccgtctcggctccggacggccggttcgtgctggtgctcggcgacttcggccggggc
aagacgttcgcgttgcgcgaggtggcccgccggctgcccaccgccgcgcccgacctgatc
ccgatcctggtggagctgcgcgcgttggacaaggcgcactccgtcgacggtctggtcgcc
gcgcacctggccaaccacggcgagcaggtgatcgacctcaaggcgttccgctacatgctg
cggcagggtcgcatcgtgctgctcttcgacgggttcgacgagctggtggcccgggtgacc
tacgaccgggcggccgaccacctggagacgctgctccaggccgccgagggcgcggcgaag
atcgtggtgagcagccggacccagcacttcaagaccaactcgcaggtgctgaccgcgctg
ggcgagcgcgtcggcctgctgccgcaccggcgggtgctggcggtggaggacttcaccccc
ggccagatcgagacgttcctgcgcaaccgctacggcggcgacgagcaggccgcgcgggag
cggatgagcctgctcggcggggtcaaggacctgctcggcctctcccgcaacccgcgcatg
ctcggcttcatcgccaacctggacgaggggcggttggcggcggtggccggggccggcggc
acgttcagcgccgccgcgctctaccgggagatcctggagtcctggctggacttcgaggag
cggcgcacccagggcatcccgggcgccccggtcagcctgcgccggccggagatgtggcag
gcggtgagccggctggcgttccagctctgggagagcggcgagtcctacctccggttggcc
gagttggccgagtccaccggccagctcgccgggcgggccgactcgcggctgtccgggccg
caggccacccacgcggtcggcgccggcagcctgctggtccgcaccgacgacgggctgttc
ggcttcatccacacctcggtgatggagtggctggtcgcggagggggtcgccgaccagctc
aaccggggcgaggagccggcggcgctggcggtgcggtcgctgtccgcgctggccgtggag
tttctcggcgacctcgccgacccggcccggtgcacggcgtggacggcgcgggtgctcggc
gacgagtcggcgggcgagacgctgcgcgccaacgcgctgcggctcagcgcccggctgcgc
ctgcccgaccgggccgatctgcgcggcgcggtgctgcgcggcgaggacctgtcgcaccgg
gagctggccggcgccgacctgaccggcgcggacctgaccgacacccggctggtggccacg
aacctgaccgaggcgcggctggagcacgcccggctgcggggggcccgcctggaccaggcc
cgcctcgccggcgcggacctgcgcgacgcggagctggccggcgcccggctgttccgggcc
gacctgcgcggggcgcggatcaccggcagcagttggcaccgcaccgccctgattgacgtg
agcgccgacccgacgttgctgcgtgccccggagctgcgcggcgccgtcgtcgcgccgggc
cggccggtggcgccgggcctggccccgcccgcggtgggcgtgggctacggcttcgaggtg
ggccggctgccggtgccggtcgcctacagcccggacggcgcggtgctggcggtgggcagc
gacgacggcggtgtgctgctctgcgacacggccaccgggctgccggtgcggaccctccag
ggccaccggtcccgggtctacgcggtccgctacgacgacgcctcgcaccagctcgtcacc
ggcgcggccgacctgaccgtacggctgtgggacgccgaccacggcgacgtgcggcacgtc
atcgaggacgtcttcgcgggctgggtgtggccgctgctcaccgacgggcgccggggtcgg
ctggtggtcggcgacgcggccggcgtggtgcggctcttcgacacccgcaccgcccggctg
cgccacgagtggcccgggcacgacgcgccgatttggggcacctcgttcagcccggacggc
cggcgggtggtggtggcggacagcgccggcacggtgcgcggctgggacatccacaccggc
cggctcgcgttcgaggtgcgcgagccggaggtggtctaccgggtggtgcactcgccggac
gggcggctgctggccgccgtcgggcagcacggccgggtgtggatccgccgggccaccgac
ggcgagctgctgcgccagccgcgcggtcacgaggccgacgtgtacgccctcgacatccac
ccggacggcacgctgatggccaccggtgacacgcacggggcgctgcggttgtgggagacg
gagaccggccgcccggtgcgggtgctgggccggcagcgcggcgcgatctacagcgtccgg
ttcaacggcgacggcagcctgctcgccaccgccgccagcgacggcgcgatccagctctgg
gacaccgacgacggtcaactgcggcacgagctgacccggcaccgcggctcggtctggccg
gtggtctggcggccggaccagaaccaggtggcgaccagcagcaacgacggcaccacccga
ctgtgggacgtgcgcaccgggcagctccagcagacgctgcgcgggcacggccggcgggtc
accgcgctctccttccgcgacgacggggaggtgttggcggcctgcggcaacgacggcgtg
atccggctctgggagccgcgtaccggccgcctgctgcggcagctcgccagcccggccgac
cgcctgctctcggtggtgttctgcccggacgagccgctggtggccgcgcccagcggcgac
ggcggcgtgcacctgtggaacaccgacaccggcgccgacgagcgggaactcaacgtggac
accgaccacgtctgggcggtcgcgttcagcccggacggcgacgccctggcgaccgcgaac
gacgacgacacggtccgcctgtggtaccgccgcaccggccggcacttcgccacgctcacc
ccgcaccggggtcgggtgcgcacggtggcgttcagcccggacggcgagaccatcgccacc
ggctgcgacgaccagatggtccggctctgggacgcggccacggccacctgccggctgacc
ctggagcaccacaccgaccgggtctactcggtcgggttcaacagcgaggggacgctgctg
gccagcgccggcaacgacggcacggcggcgatctgggacgtggccaccggcgagcggcgc
gccgtgctcaccgagcacgtcgggcggctctggtcgtgcgcgttcagcccggacggcaac
ctgctcgccaccgctggcgacgacctggtgatccggctctgggacccggtcaccgggcgc
cggcacggcacgctcgccgcgcacacccggcgggtgtggtcggtgcacttcagtccggac
agcagcctgctggccagcgccggcgacgacggcacggtccggctgtgggacgtggcggac
ccggagcacgcgcagttgcgcacgaccctgatcggcctgccggacggttgggcggcggtg
agccccgacggccgctacaagctcgacggcgacccgggcggccagttctggcacgtcatc
ggcacctgccgcttcgaggtcggcgaactcgacccctacctcacccaggtccgccgcctg
gcggtagacgcccccttctga
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