Micromonospora robiginosa: H1D33_22785
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Entry
H1D33_22785 CDS
T09299
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mfeu
Micromonospora robiginosa
Pathway
mfeu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfeu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H1D33_22785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfeu03019
]
H1D33_22785
03009 Ribosome biogenesis [BR:
mfeu03009
]
H1D33_22785
Enzymes [BR:
mfeu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H1D33_22785
Messenger RNA biogenesis [BR:
mfeu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H1D33_22785
Ribosome biogenesis [BR:
mfeu03009
]
Prokaryotic type
rRNA helicases
H1D33_22785
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
WSD
Motif
Other DBs
NCBI-ProteinID:
QLQ36139
UniProt:
A0A7L6B2F3
LinkDB
All DBs
Position
complement(1859284..1861038)
Genome browser
AA seq
584 aa
AA seq
DB search
MSAAPTPTDPTAPADAEDAPAFADLGLRAELLGALSALGYEEPTPIQSEAIPPLLAGRDL
LGQAATGTGKTAAFALPLLQRMPVARPDGDPVSLVLVPTRELAVQVSEAFHRYGKDLGAR
VLPIYGGQPIGRQLRALDHGVDVVVATPGRALDHIARGTLRLGSLATVVLDEADEMLDMG
FAEDIEAILEHAPEGRQTVLFSATMPARIDGLARQHLTDPVRIRIERERPVAGAAPKVRQ
SAYLVARAHKPAALGRVLDVESPTAAIVFCRSREEVDRLTETMNGRGYRAEALHGGMSQE
QRDRVMGRLRGGTADLLVATDVAARGLDVEQLTHVVNYDVPSAPEAYVHRIGRVGRAGRE
GVAITLAEPREHRMLKTIERVTGQRITIDKIPTVADLRTRRFELTQAAVREALLEDDLEP
FRAVVESLTDEFDLMEVALAAVRLAHEATLPGTADEEEIPQVAVRANRDGRPGTEGRDRR
AGVRSRAAGTAQVFIGLGRRAGVRPQDLVGAITGETRASGRDIGSIEIADRFSLVEVPQE
LADEVIAGLRGSTIKGRKATVRRDRDGQGDPGGERRYEGRRDRR
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgcaccgaccccgaccgaccccaccgcccccgccgacgccgaggacgccccc
gccttcgcggatctcgggctgcgcgccgagctgctgggggcgctgtccgccctcggctac
gaggagcccaccccgatccagagcgaggccatcccgccgctgctggccggtcgggacctg
ctcgggcaggcggcgaccggcaccggcaagaccgccgcgttcgcgctgccgctgctgcag
cggatgccggtggcgcgcccggacggcgacccggtgtcgttggtgctggtgccgacgcgg
gagctggcggtgcaggtctccgaggcgttccaccgctacggcaaggacctgggcgcccgg
gtgctgccgatctacggcggccagccgatcggccggcagttgcgcgccctggaccacggg
gtggacgtggtggtggcgacgcccgggcgggcgctcgaccacatcgcccggggcacgctg
cggctgggctcgctggccaccgtggtgctggacgaggcggacgagatgctcgacatgggc
ttcgcggaggacatcgaggcgatcctggagcacgcccccgagggccggcagacggtgctc
ttctcggccaccatgccggcccggatcgacgggctggcccggcagcacctgaccgacccg
gtccgcatccggatcgagcgcgagcgcccggtggccggggcggcgccgaaggtgcggcag
agcgcctacctggtggcgcgggcgcacaagccggccgcgctgggccgggtgctggacgtc
gagtcgcccaccgcggcgatcgtgttctgccgcagccgggaggaggtggaccggctcacc
gaaacgatgaacggccggggctaccgggccgaggcgctgcacggcgggatgagccaggag
cagcgggaccgggtgatgggccggctgcggggcggcaccgcggacctgctggtcgccacc
gacgtggcggcccgggggctggacgtcgagcagctcacccacgtggtgaactacgacgtg
ccgtccgcgccggaggcgtacgtgcaccggatcgggcgggtcggccgggccgggcgggag
ggggtggcgatcaccctcgccgagccgcgcgagcaccggatgctcaagacgatcgagcgg
gtcaccggccagcggatcaccatcgacaagatcccgacggtcgccgacctgcggacccgg
cggttcgagctgacccaggccgcggtgcgggaggccctgctcgaggacgacctggagccg
ttccgggcggtcgtcgagtcgctgaccgacgagttcgacctgatggaggtggcgctcgcc
gcggtgcggctggcgcacgaggccaccctgcccggcaccgcggacgaggaggagatcccg
caggtcgccgtccgcgcgaaccgggacgggcggccggggaccgagggccgggaccggcgg
gccggggtacgctcccgcgccgccggcaccgcccaggtcttcatcggcctgggccggcgg
gccggggtgcggccgcaggatctggtgggcgcgatcaccggcgagacccgggccagcggc
cgggacatcggctcgatcgagatcgccgaccggttctcgctggtcgaggtgccgcaggag
ctggccgacgaggtgatcgcggggttgcgcggcagcaccatcaagggccgcaaggcgacc
gtccggcgcgaccgggacggccagggcgacccgggtggcgagcgccgctacgagggccgg
cgcgaccggcggtag
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