Mariniblastus fucicola: MFFC18_08170
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Entry
MFFC18_08170 CDS
T06181
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
mff
Mariniblastus fucicola
Pathway
mff02020
Two-component system
mff02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mff00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MFFC18_08170 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MFFC18_08170 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mff03021
]
MFFC18_08170 (rpoN)
Transcription machinery [BR:
mff03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MFFC18_08170 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_23
LacI
HTH_24
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
QEG20966
UniProt:
A0A5B9P8M5
LinkDB
All DBs
Position
1102170..1103618
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AA seq
482 aa
AA seq
DB search
MAPRMIQSMEILRMAATELEEKIEQELIENPILEQHTVDPDSTPEEKPKKEKEKDVEQKE
LVIEEGDNANNEDDFERLVNLDQDVPDHFDERPRVSSNRVQESGDRQHDLMANVATRSET
LQDYLLSQLGEREVEPDVMKFCEKIISAISAESGGYFKASLTDLLPLDASPEAIELAEIA
LAHVQDLEPKGVGARDLKECLLLQLTLDIENYHSVHKLIVDHLDDLMHNRLPVIEKATGM
SIEEIYAARDELRKLDPRPASEFADNFVAVVKPDLWLEQDDEGKWVVKMDEGPARNLYIS
RYYRERLKKGKATKAEKEFIKGKISSAQWLIESIEQRRSTLLRVAQAIFDHQSDFIDKGP
EFLKALKMDQIAERVGVNLSTVSRAVDDKYIETPRGIVALRAFFIQGTQTDAGEDVTYNK
IRIELQKLIDNEDKAKPLSDFEIMNRLKNMSFDIARRTVSKYREKMGIPNTRQRRDYRAA
KK
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggctccgcggatgatccagtcgatggaaatcttgcgtatggccgcgacggagcttgag
gaaaaaattgagcaggagctgatcgaaaatccgatcctcgagcaacatactgttgatccg
gattcgactcctgaagagaaaccgaaaaaagaaaaagagaaggacgtcgagcaaaaagag
ctggtcatcgaagagggcgacaacgccaacaacgaggacgattttgaacgattggtcaat
cttgatcaggatgtcccggaccactttgacgaacggcctcgagtttcctccaaccgcgtg
caggaaagcggtgaccgacaacatgacttgatggccaacgtcgccactcgtagcgaaacg
ctgcaggattatctgctcagccaattgggagagcgtgaagtcgagccggacgtgatgaag
ttttgcgagaaaatcatctccgcgatttcggcagagagcggcggctacttcaaagccagc
ctgacagatctgttgccgcttgacgcttcacccgaagccattgaactcgctgaaatcgcg
ttggctcatgttcaggatctggaacccaagggcgtcggtgcacgcgatctgaaagagtgt
ttgctgttgcaattgacgcttgatatcgaaaactatcacagcgttcacaagctgatcgtg
gatcacctcgatgacttgatgcacaaccgtttgccggtgatcgaaaaagcaaccgggatg
tcgatcgaagaaatttacgcggcccgagacgagctgagaaaacttgatccgcgtccggcc
agtgaattcgcggacaactttgtggcggtcgtcaaaccggacctgtggcttgagcaggat
gacgagggcaagtgggttgtgaagatggacgagggtcctgcgagaaacctttacatcagc
cgctactatcgtgagcgattgaaaaagggcaaggcaacgaaggctgagaaggagtttatc
aaaggcaagatttcgtcggctcaatggttgatcgaatcgatcgagcagcgtcgaagtacg
cttcttcgtgtcgcgcaagcgatctttgatcaccagtctgacttcattgacaaagggccc
gagtttctcaaggcgctgaaaatggatcagattgcggaacgcgttggcgtcaatctgagc
acggtcagccgcgcggtcgatgacaagtacatcgaaacgcctcggggaattgttgcttta
cgagcgttctttattcaagggacgcaaacggatgctggcgaagatgtgacctacaacaag
atccgtatcgagttgcagaagttgatcgacaacgaggacaaagccaaaccgctcagcgat
ttcgaaattatgaatcgcttgaagaacatgagctttgatatcgctcgtcggacggttagc
aagtatcgcgagaagatgggaattcccaacacgcgtcagcgtcgcgactatcgcgccgca
aagaagtag
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