Mariniblastus fucicola: MFFC18_09440
Help
Entry
MFFC18_09440 CDS
T06181
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mff
Mariniblastus fucicola
Pathway
mff03030
DNA replication
mff03430
Mismatch repair
mff03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MFFC18_09440 (dnaE)
03430 Mismatch repair
MFFC18_09440 (dnaE)
03440 Homologous recombination
MFFC18_09440 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mff03032
]
MFFC18_09440 (dnaE)
03400 DNA repair and recombination proteins [BR:
mff03400
]
MFFC18_09440 (dnaE)
Enzymes [BR:
mff01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MFFC18_09440 (dnaE)
DNA replication proteins [BR:
mff03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MFFC18_09440 (dnaE)
DNA repair and recombination proteins [BR:
mff03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MFFC18_09440 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
PHP_C
T2SSK
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QEG21092
UniProt:
A0A5B9P800
LinkDB
All DBs
Position
complement(1246576..1250157)
Genome browser
AA seq
1193 aa
AA seq
DB search
MSNRPFTHLHCHSHYSLLDGASSIPKLVQRTKDHGMNALALTDHGNMHGSLEFYNTCRAN
DINPIIGYEAYIAPGSRKVKGEGGRKNSSYHLTLLCQNKTGFDNLIKMASSAALEGFYFK
PRIDKELLEAHSEGIICLSGCVSSEFSKAILNNGGNGAEEQLEDAIGVAEWFRNLFGERY
FVEIMNNGLDIQRQQLEGAVEVAKRVGLPLVATSDCHYVDREDASAQDVMLCINTGRFRT
DQNRMKMDVDEFYLRPPEEMYANFVGLEDAVSRSQEIADSVDIQLTLGERYFPVFDLPLE
TDTPESKLRELCEQGLKERYAKTPGMLTEDGGLTEIVQARLDRELGVINKLGFANYFLIV
WDFVEQARIRDIPTTARGSGVGAIVCYALYMSHVCPIKYDLLFERFLDENRLEAPDIDID
FCKERRGDIIKYVKEKYGEESVAQIGTFGTMKAKAAIKDVGRALGIPLARVNEITKMIPD
VLGIKIKTALETSDELRAAYEGDPEITELIDFAMKLEGLARNIGTHAAAVVIGNGPLDNY
VPLGKVSGKDDVITQWSMNDVEAAGLLKMDFLGLRNLTILSNVVNIIEQTRGERIDIHEF
PLDDKPTYALLQRGETKGVFQMESGGIRDLLQRMKPDHFLDIIATAALYRPGPLEGGMVD
QYIDVKHGRKEPEYKIELMREILEETNGVMVYQEQVMRILNRVGKIPLASAYTCIKAISK
KKEKLIAQNYEGYMKGAVEQGLSKKDAQELWDMILKFAGYGFNKSHSTAYALIAYQTAYL
KCHYPIEFMAALLTGDIPGRNFVGKDALVEHMEDCDRMGIDVVAPSVNTSDVHFKVDEQN
EVHFAMSAIKGCGASAAQAIVDERTENGPFKDIFDFCERVESSKCSRSSVESLIKAGAMD
CFGGHRAQLMAALDRAIQAGASAQADKKSGQLNLFGTPEPAADDEPETVDMPDVPEWEER
EKLTFEKEVLGFYLTSHPLAEYVDRLEQFCSHKTSELEGSKHRDKVSMGGMIASLRLAHT
KNQKSPSDPTKYAMFDLEDVDGAIRTIAWPSTYTSVSEVIKPDAVVVVQGKLDYRGDEPN
LIVDKMVPIDDLGSTMTTGIKIMIDQNMHGHDGLKTAYEIIRGYPGNRQLKIELVLEDGM
RVQLDSNRKIEVSEQLCGRLQELLGASGVEMLVDTKSLSEKAGPEKKWRRKKE
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccgcccatttacgcatctgcactgtcacagccattactctttgctcgatgga
gccagctcgatcccgaaactggttcagcggaccaaagaccacggcatgaacgcgctggcg
ttgaccgaccatggcaacatgcacgggtcgctcgaattctacaacacctgtcgtgcgaac
gacatcaatccgatcattggctacgaagcctacatcgcgcccggcagtcgcaaagttaag
ggcgaaggcggacgaaagaactcgtcctatcacctgacgctgttgtgccagaacaaaacg
ggtttcgataacctgatcaaaatggcgtcctccgcggcgctcgaagggttttactttaag
ccgcggatcgacaaggaactgctcgaagcccacagcgaaggcatcatctgcctcagcggt
tgcgtatcgagcgagttcagcaaagcgatcctcaacaacggcggcaacggtgcggaagag
cagcttgaggatgcgatcggcgttgctgagtggtttcgcaatctgttcggtgaaagatac
ttcgtcgagatcatgaacaacgggctggacattcagcgtcaacaactcgaaggcgccgtt
gaagttgccaaacgagtcggccttccactggtcgcgaccagcgattgccactacgtcgac
cgcgaagacgcttcggctcaggatgtgatgctatgcattaacacgggccgatttcgcacc
gaccaaaaccgcatgaagatggatgttgacgagttctacctccgtccgccggaagagatg
tatgccaatttcgtcggcctcgaagacgccgtgtcgcgatcgcaggaaatcgccgattcg
gtcgacattcaactgactctcggcgagcgatattttccggtctttgatctgccgctggaa
acagacacgccggaaagtaaactgcgggagctttgcgaacaagggctgaaagaacgctac
gcaaaaacgcccggtatgctcacggaggacggcgggctaaccgaaatcgttcaagcccga
cttgatcgagagctgggcgtcatcaacaagcttgggttcgcgaactactttctgatcgta
tgggactttgtcgaacaggcccgcattcgcgacatcccgacgacagctcgtggctcaggc
gtcggtgcaattgtctgttacgctctctacatgagccacgtttgcccgatcaaatacgac
ttgctgttcgaaaggttcctggacgaaaatcgcctggaagcgcctgatatcgacatcgac
ttctgtaaggaacgtcgtggcgacattatcaagtacgtgaaggaaaagtacggcgaagaa
tcggttgcacagatcggaacctttggcacgatgaaagccaaagccgcgatcaaggatgtc
ggccgagctctcggaattccactggctcgtgtgaacgagatcacgaagatgatcccggat
gtgctgggcatcaaaatcaagacggcgctcgaaacaagcgacgagcttcgcgctgcctac
gaaggcgatccggaaattacggagctaatcgatttcgcgatgaagctggaagggctggcg
cgaaacatcggtactcacgccgcggccgtcgtgattggaaacggcccgctggacaactac
gttccgctgggaaaagtctccggcaaggatgacgtgatcacgcagtggtcgatgaacgac
gtcgaagccgctggtctgctgaagatggactttttggggctgcgaaacctcacgattttg
tccaacgtggtgaacatcattgagcaaacgcgtggagagcgaatcgacatccacgagttt
ccgctcgacgacaaaccgacttatgcgttgctgcaacgcggcgaaacgaaaggcgttttc
cagatggaaagcggcgggatacgcgacctgttgcagcggatgaagcctgaccacttcctg
gacatcatcgcgacggcggctctttatcgtccgggacctctcgaaggcgggatggtcgat
caatacatcgatgtgaaacacggtcgcaaggaacccgagtacaaaatcgagctgatgagg
gagattctggaagagaccaatggcgtgatggtctaccaggaacaggtgatgcggattctg
aatcgcgtcggcaagatcccgctggcttccgcgtacacgtgcattaaagcgatcagtaaa
aagaaagaaaaactgatcgcccagaattacgaaggctacatgaagggcgccgttgagcag
ggtctttccaagaaagacgctcaggaactttgggacatgatcctgaagttcgcgggctac
ggtttcaacaaaagtcactcgacggcttacgcgttgatcgcctaccaaacggcctacttg
aaatgccactatccgattgagttcatggccgcgttgctgacgggcgacatcccagggcga
aacttcgtcggcaaagatgctctggtcgaacacatggaagactgcgaccggatgggcatc
gacgtggtcgcgccaagcgtcaacacttcagacgtgcacttcaaagtcgacgaacagaac
gaagttcacttcgcgatgtcggcgatcaaaggctgcggggcgtcggcggcgcaggcgatc
gttgatgaacgcaccgaaaacgggcctttcaaggacatctttgatttctgcgaacgcgtt
gagtccagtaaatgtagtcgctcttcggtcgaaagcctgattaaggccggcgcgatggat
tgctttggcggacaccgggctcagttgatggctgctctcgatcgcgcgatccaagccggt
gcttcggcgcaggctgacaagaaaagcggccaattgaatctgtttggaacgccggaacct
gccgccgacgacgaaccggaaacagtcgacatgcccgacgttccggagtgggaagagcgt
gaaaagctgacgtttgaaaaagaggttttaggtttctacctgaccagccatccactggcc
gaatacgttgatcgactggagcagttctgttcgcacaagaccagtgaacttgaaggcagc
aagcaccgcgataaagtcagcatgggcggtatgatcgcgtcgttgaggttggctcacacc
aagaaccagaagagcccaagtgatccgacgaagtatgcgatgttcgatcttgaggatgtc
gatggcgcgatccgcacgattgcctggccgtcgacttacacttcggtcagcgaagtcatc
aagccggatgcggttgtggtggtccagggaaaactggattatcgcggagacgagccgaac
ctgatcgtggacaagatggtgccgatcgatgaccttggttcgacgatgacgacggggatc
aaaattatgatcgaccagaacatgcacggccacgacggactgaaaacagcttacgaaatc
atccgcggctatcccgggaatcggcaactgaagattgaactggtgctggaagacgggatg
cgagttcagctcgattcgaatcgcaagatcgaagttagcgagcagctttgcggcaggttg
caggaattgctgggagcctcgggcgttgagatgctggtggacacgaagagcctgtcagag
aaagccggcccggagaaaaagtggcggcggaagaaggagtag
DBGET
integrated database retrieval system
