Mariniblastus fucicola: MFFC18_22310
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Entry
MFFC18_22310 CDS
T06181
Symbol
pcrA_1
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mff
Mariniblastus fucicola
Pathway
mff03420
Nucleotide excision repair
mff03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MFFC18_22310 (pcrA_1)
03430 Mismatch repair
MFFC18_22310 (pcrA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mff03400
]
MFFC18_22310 (pcrA_1)
Enzymes [BR:
mff01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MFFC18_22310 (pcrA_1)
DNA repair and recombination proteins [BR:
mff03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MFFC18_22310 (pcrA_1)
MMR (mismatch excision repair)
Other MMR factors
MFFC18_22310 (pcrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
QEG22351
UniProt:
A0A5B9PHJ7
LinkDB
All DBs
Position
2787947..2789938
Genome browser
AA seq
663 aa
AA seq
DB search
MSGLNAAQQEAVDTLSGPLLVLAGAGTGKTRVITFRIAKLIKHGVPRHKILGVTFTNKAA
NEMKERLTGLIGGSIGTKNKYKKKAEQSENEPTISTFHSLCVRILRRRIEKLGYPLKFAI
YNRGDQESLARQILREIRVPDKALKPNQLLFHISNWKCKSLNAKQAMMQSESDAQHLAAV
GFERYQKQLKLRGAVDFDDLLLLTEQLFREHPDVRQEEADRFDHLLVDEYQDTNTSQYRI
VKALAGEHRNLCVVGDDDQSIYAWRGAEVEHILAFAKDWPDAKVVRLEENYRSTEAIIKY
ANTLIRFNSTRHDKVLVAARPGGELPIINQWEDETQEAEEVVRSISNRLNLHGREPRDFA
ILFRTNEQPRPFETALREAKLPYILVGGMSFFDRKEVKDVLAYLRLLDEPDEVSILRIIN
TPPRGIGKKSIENLLDRTVREKVPMWDMVCGYAERPKVTARVKQGLDQLAAAVNEVRSVA
GNHSLVDQARMLIDKIDYKSEIDRIYSEPDDRESRWSVVEQVVNALADYEQSRKKPTMTN
FLDRLLLGDQDANSDKEKQLKKNAIALMTMHAAKGLEFPEVYIVGLEEGILPHQRSLEDD
EAGVPEERRLCYVGVTRAEERLTMSMSLTRKKWGKARETIPSRFLYELTDQADNPNYAKC
SKR
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtctcaacgcagcacaacaggaagccgtcgacacgctgtccggcccgttgctg
gtgctcgccggtgccgggactggaaaaacacgcgtcattacgttccgcatcgctaaactg
atcaagcacggggtgccgcgacacaaaatcctcggtgtgacgttcacaaacaaggccgcc
aacgagatgaaggaacggctcaccggtttgatcgggggcagcattggcaccaaaaacaag
tacaagaagaaggcagagcagtcagaaaacgagccgacgatttcgacgtttcactcgctc
tgcgttcgaatcctgcgtcgccgcatcgaaaaactgggctatccgctgaagttcgctatc
tataatcgcggcgatcaagagagcctggctcggcagatcctgcgagagatccgcgttccc
gataaggcgctcaagccaaatcaactgctgttccacatcagcaattggaagtgcaagtcg
ctcaatgcgaaacaggcgatgatgcagagcgaatcggacgctcaacacctggcggcggtc
gggtttgagcgttatcagaaacagctgaaacttcgcggagccgtcgatttcgacgatctg
ctgctgctgacggagcagctgtttcgcgaacatccggatgtgcgacaggaagaagccgac
cgattcgatcatctgctggtcgacgagtatcaggatacgaacaccagccagtatcggatc
gtgaaagctctcgccggcgaacaccgcaacctgtgcgttgtgggcgacgatgatcagtcg
atctacgcgtggcggggagcagaggtcgagcacattttggcgttcgcgaaagactggccg
gacgcgaaggtcgttcgtctggaggaaaactatcgctcgaccgaagcgattatcaagtac
gccaatacgctgatccgatttaactcgacgcgccacgacaaggtccttgttgcggctcga
cctggcggcgaacttccgatcatcaatcagtgggaagacgaaacgcaggaagccgaagaa
gtcgttcgctcgatcagcaatcggttgaatttacacggacgcgagccgcgagattttgcg
attctgtttcgcaccaatgaacagccgcggccgtttgagacggcgctgcgtgaagccaaa
ctgccttacattctcgtcggcggcatgtcgttctttgatcgcaaggaagtcaaagacgtg
ctggcgtatttgcgtttgctggacgaaccggacgaagtttccattttgcgaatcatcaat
acgccgccgcgcgggatcggcaagaagtcgatcgagaatctgctggaccggacggttcgc
gagaaagtcccgatgtgggatatggtttgcggatatgcagagcgtccgaaggtgacagcg
cgggtcaagcaggggctggatcaacttgcggcggcggtgaatgaagtccgcagtgttgcg
gggaaccattcgctggtggatcaggctcggatgctgatcgacaagatcgactacaagtct
gagattgaccggatttattcggaacccgacgaccgcgagagccgctggagcgttgtggag
caggtggtgaacgcgcttgcggattacgaacagagccggaagaagccgacgatgacgaac
ttccttgatcgcttgctgcttggcgaccaggatgcgaacagcgacaaggaaaagcagctt
aaaaagaatgcgatcgctttgatgacgatgcacgcggcgaagggtctggagttccccgag
gtctacatcgtcggtttggaggaaggcatccttccgcaccaacgttcgctggaagacgac
gaagcgggtgtgccggaagagcgacgcttgtgctatgtcggcgtaacgcgagcggaagag
cggctgacgatgtcgatgagcctgactcgcaagaaatggggcaaggcccgcgagacgatt
cccagtcggttcctgtatgagctgaccgatcaggccgacaacccgaactacgcgaagtgc
agcaagcgctag
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