Mariniblastus fucicola: MFFC18_34910
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Entry
MFFC18_34910 CDS
T06181
Symbol
rpoA_2
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mff
Mariniblastus fucicola
Pathway
mff03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mff00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MFFC18_34910 (rpoA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mff03021
]
MFFC18_34910 (rpoA_2)
03400 DNA repair and recombination proteins [BR:
mff03400
]
MFFC18_34910 (rpoA_2)
Enzymes [BR:
mff01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MFFC18_34910 (rpoA_2)
Transcription machinery [BR:
mff03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MFFC18_34910 (rpoA_2)
DNA repair and recombination proteins [BR:
mff03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MFFC18_34910 (rpoA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
TPR_2
TPR_1
TPR_16
TPR_6
TPR_19
TPR_14
TPR_12
TPR_17
TPR_11
TPR_8
TPR_7
ANAPC3
MIT
TPR_9
HAT_PRP39_C
ARM_TT21_N
TPR_CcmH_CycH
TPR_Slam
Paf67
Sel1
Motif
Other DBs
NCBI-ProteinID:
QEG23590
UniProt:
A0A5B9PEK6
LinkDB
All DBs
Position
complement(4441484..4442815)
Genome browser
AA seq
443 aa
AA seq
DB search
MAQMPEVQPQLKDILLSNSSFGPSEIKFVAERICNDFSQFPQLKEVTQELEGQMSRTPAS
SVRLGVCQYMLGRYSDAITTLENADGGALAQFYQGKSHFGLGGYDRAIECYEAAKTAGYD
NDTCLLAIAECKRHAGDLEGAMSIVDNIFGPTEQTAEYLYQRGASIAATCTNPEEVCRLY
ERAVEIDEQHGGALFGLALENDRRGNDEKAIELYQRAAAVFPTNVGTLLNLGLLYEDHEQ
YERAARCYDRILESFPTHDRAILYRRDSVASMDEQYDHDREKMRQQIAGVMSIPIAQFEL
SVRSRNCLQKMGILMLGDLTKVSESELLNSKNFGETSLVEIREMMANKGLMIGQFANQKE
TEDEPMDTSHLSADEQALLDRPISDLNLSVRARKCMTRLGLATIGELIRKSPDDLLECKN
FGVTSLTEVREKLTQVSLKLRGE
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatgcctgaagttcagcctcaacttaaagatatcctgctgtccaacagttct
tttggaccttccgaaatcaagttcgttgccgagcgaatctgcaacgacttctctcagttc
ccgcaactcaaggaagtcacccaggaacttgaaggccagatgtcgcggactcctgcgagc
tcggttcgcctgggagtttgtcagtacatgcttggtcgctactccgacgcgatcacgacg
ttggaaaacgcggacggtggagcattggctcagttctatcaaggcaagtcccatttcggg
cttggcggatacgatcgcgcgattgaatgctacgaagccgcgaaaactgcgggctacgac
aatgatacttgcctgttggcgatcgccgaatgtaagcgtcatgctggcgatctcgaaggc
gccatgtcgatcgtggacaacatttttggccccaccgaacagacggctgagtacctgtat
cagcgtggtgcatcgatcgcggcgacatgtaccaatccggaagaagtctgccggttgtac
gaacgagccgtcgaaatcgacgaacagcacggtggtgctctgttcggtttggctctcgaa
aacgaccgccgtggtaacgacgagaaagccatcgaactgtaccagcgagcagcggctgtg
ttcccgaccaacgtcggaacgctgctgaatcttggtttgctgtacgaagatcacgaacag
tacgaacgagccgctcgctgctacgatcggatccttgaatccttcccaactcacgaccgt
gcgattctctatcgtcgcgattcggttgcgtcgatggatgagcaatacgatcacgaccgt
gagaagatgcgtcagcagattgccggcgtgatgagcattccaattgctcaattcgagctt
tcggttcgcagccgaaactgcctgcaaaagatgggcattttgatgcttggcgatttgacg
aaagtcagcgaatcggagttgctcaactccaagaactttggcgagacgtcgctggttgag
attcgcgagatgatggccaacaaagggctgatgattggccaattcgccaaccagaaagaa
accgaagacgagccgatggacaccagtcatttgtctgccgatgagcaggcgttgctggac
cgtccgatttctgatctgaacctttcggttcgtgcccgcaagtgcatgacgcgtttgggt
ttggcgacgatcggcgaattgatccgcaaatcaccggacgatctgctggagtgcaaaaac
ttcggcgttacaagcttgaccgaagttcgcgaaaagttgactcaggtcagtttgaagctt
cgcggcgagtaa
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