Mariniblastus fucicola: MFFC18_41980
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Entry
MFFC18_41980 CDS
T06181
Symbol
rpoA_3
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mff
Mariniblastus fucicola
Pathway
mff03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mff00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MFFC18_41980 (rpoA_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mff03021
]
MFFC18_41980 (rpoA_3)
03400 DNA repair and recombination proteins [BR:
mff03400
]
MFFC18_41980 (rpoA_3)
Enzymes [BR:
mff01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MFFC18_41980 (rpoA_3)
Transcription machinery [BR:
mff03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MFFC18_41980 (rpoA_3)
DNA repair and recombination proteins [BR:
mff03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MFFC18_41980 (rpoA_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QEG24280
UniProt:
A0A5B9PGA5
LinkDB
All DBs
Position
complement(5293574..5294563)
Genome browser
AA seq
329 aa
AA seq
DB search
MHIRWRGLELPSVVNCDRETLTANYGKFVAEPFERGFGTTIGNSLRRVLLSSLEGSAVTQ
LKIRGANHEFSSIPGVLQDVTDIVLNVKSLIVKNHTDQMKVITIEKDTAGPVTGADIQTN
GEVEVINSDHVLVDLTEDVPFMMEMVVENGRGYVPSTEHSGRDHEIGIIPIDAIYSPITR
VRYDVEETRVGQKTNYDKLTLEVWTDGSINPEMAMVEASKVLRKHLNPFVQYAELGAQVH
AQPQSKGGIDAALEAKLNMPVAEMRLSVRANNCLEFANIGTVRDLVAYNEDQLMEIRNFG
ETTLVEVRQVLTGLGLHLGMKVPKAPVIT
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcacattcgatggcgtggccttgaacttcctagcgttgttaactgcgatcgtgagacg
cttaccgcgaactatggcaagttcgttgcggaaccctttgagcgtggtttcggaacaaca
atcggcaatagcctgcgtcgcgtactgctttcgagcctcgaaggtagtgctgtgacccaa
ctcaagattcgtggtgccaatcacgagttttcttcgattccaggcgtcctacaggatgta
acggacatcgtgctgaacgttaagtcgttgatcgtcaaaaatcacaccgatcagatgaaa
gtcatcacgatcgaaaaggataccgctggtccagtgaccggtgctgatatccagaccaac
ggcgaagtcgaagtcatcaatagcgaccacgtcctggttgatttgaccgaagacgttccg
ttcatgatggaaatggttgtcgaaaacggtcgtggctatgttccttcgacggaacacagt
ggtcgtgatcacgaaatcggcatcattccgatcgacgctatttacagcccgatcacacgc
gttcgctatgacgttgaagaaacgcgtgtcggacagaaaacgaactatgacaagctgact
ttggaagtttggacggacggttcaatcaatcctgagatggcgatggtggaagcttcgaag
gtacttcgtaagcacctcaatcctttcgttcagtacgccgagcttggagctcaagtacac
gctcagccgcaaagcaaaggtggcattgatgcggctcttgaagccaagctcaacatgccg
gtagctgaaatgcgactttcggttcgagctaacaactgccttgagtttgcgaatataggg
acggttcgtgatcttgtggcttacaacgaagaccagctgatggagattcgcaactttggc
gaaaccacactggttgaagtacgacaggttctgacaggcttgggtttgcacctgggcatg
aaggttcccaaagctcctgtgattacgtaa
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