Mariniblastus fucicola: MFFC18_43610
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Entry
MFFC18_43610 CDS
T06181
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mff
Mariniblastus fucicola
Pathway
mff03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mff00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MFFC18_43610 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mff03019
]
MFFC18_43610 (pnp)
03016 Transfer RNA biogenesis [BR:
mff03016
]
MFFC18_43610 (pnp)
Enzymes [BR:
mff01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MFFC18_43610 (pnp)
Messenger RNA biogenesis [BR:
mff03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MFFC18_43610 (pnp)
Transfer RNA biogenesis [BR:
mff03016
]
Prokaryotic type
tRNA degradation factors
MFFC18_43610 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH_2
KhpA-B_KH
SLS1_KH2
RecX
Motif
Other DBs
NCBI-ProteinID:
QEG24441
UniProt:
A0A5B9PPM6
LinkDB
All DBs
Position
complement(5533890..5536676)
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AA seq
928 aa
AA seq
DB search
MKVRVEKKIGDQTMSLETGQLAKLAAAAVVIQYGETSVICTAATGAPRPGLDFFPLMCDY
RERTIAAGKFPGGFMKREGRPTTKETLTARLIDRPIRPMFADGFKDEVQCQSFVLSSDRQ
NDGDVLAMNGVAAACFISALPFEDAVASTRVGRVDGEFVAFPTFEQLEESDMDIIVSGTD
GAVTMIEGFAREVAEDDMLAAIEFAHGICKEVIGLMRELADKFPVEKVKFESPSDNGLFE
KVKAKYFDGFSEAILTPSKKDRGAAKSEFKDKVIAEMIPDPEADNAICADALKKALYKLE
AAVIRESILDGKRTDGRGLDDLRDIECHVDVIPRVHGSAVFQRGETQAMITVTLGTGRDE
QRVDGLQDEYSKKFMLDYNFPSFSVGECRPIRGPGRREIGHGALAERSIKPVLPDVDDFP
YTIRVVSDILESNGSSSMATVCGTTLALMATGVKIKNPVAGISVGLVKEDDRHVLLTDIL
GSEDHFGDMDFKVAGSQKGITGIQLDLKIRGISNDLIKDALAQSKEARLEILRKMLTAKP
RPAESLSQYAPRLLQTQIQSDKIGMLIGPGGKNIRAIQEETETVIEVAEDGKVTISGTNG
ELADIALKKVEACTATVQVGKIYDGVVSSTKEFGAFVEILPGRDGLCHISELSNGYISDV
SDVCTVGDEMKVLVIDVDGNDRVKLSRRRALEELGLEDEFAEEEDNDDFDGGSDDDFDGD
DEGDDNDRGGRSDRDRGGDRGGRGGSDRGRSGGGGGRGRSGGGDRGGRGRSGGGGGRGRG
GRGDSDRGGRGDSDRGGRSDSDRGGRGRSDSDRGGRGRSDSDRGGRSRGDSDRGGRSDSD
RGGRGRGDSDRGGRSDSDRGERTEGDRGNRGGSGGGGGDYDRPRGGGGRGRGRSGGRGRG
GSGGGGGGRSRDGGGGRSSGGGDRGYRD
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagtaagagtagaaaagaaaattggcgaccaaacgatgtcgctcgaaaccggacag
ctcgcgaagcttgctgccgcggccgttgttattcagtacggcgaaacttccgtgatttgc
acagcggccaccggagcaccgcgaccaggactggatttcttccccctgatgtgtgattac
cgcgagcgaacgatcgcagcgggtaagttccctggcggattcatgaaacgtgaaggccga
ccaacgaccaaggaaacgttgacggctcgtttgatcgaccgtcccattcgtccaatgttc
gccgatggcttcaaggacgaagttcaatgtcagtcgttcgtgctttcaagcgatcgtcaa
aacgacggcgacgtgctggccatgaacggcgttgcagcagcctgttttatctcggcattg
ccgtttgaagacgctgttgcttccactcgcgttggtcgcgtcgatggtgaattcgttgcg
ttcccgaccttcgagcaactcgaagaaagcgacatggacatcatcgtgtccggcaccgac
ggtgccgtcaccatgatcgaaggcttcgctcgcgaagtcgccgaagacgacatgctggcc
gcaatcgaattcgctcatggcatttgcaaagaagtcatcgggctgatgcgtgagctggcg
gataaattccctgtcgaaaaagtcaaattcgagtcgccttcggacaacggactgttcgaa
aaagtcaaagccaaatatttcgacggattcagcgaagccatcctgacgccttccaagaaa
gaccgcggcgcggcgaagtccgagttcaaggacaaagtcatcgctgagatgattccggac
ccggaagcagataatgcaatctgtgcggatgctctcaagaaagcactctacaaacttgaa
gctgctgtcatccgcgaatcgatcctcgacggcaagcgtactgacggtcgcggtctggat
gaccttcgtgacatcgaatgccacgtcgacgtcattcctcgcgttcacggttcggccgtt
ttccaacgcggtgaaactcaggcgatgatcacggtcacgctgggaaccggacgtgacgaa
cagcgtgtcgacggcttgcaggacgagtactccaagaaattcatgttggactacaacttc
ccaagcttcagcgttggtgagtgtcgtccgattcgcggccctggtcgtcgcgaaattggc
catggtgctttggcggaacgctcgatcaagcctgtgctgccagatgttgacgatttcccg
tacacaattcgcgttgtgtcggacatccttgaatcaaacggttcgtcttccatggcgaca
gtttgcggtacgactttggccctgatggcgactggcgtaaaaatcaaaaacccggttgct
ggtatctcagttggcctggtcaaagaagacgatcgccacgttttgctgaccgacattctg
ggcagcgaagatcacttcggcgacatggacttcaaggtcgctggttcgcaaaaaggtatc
actggcatccagctggacctgaaaattcgcggaatcagcaacgacttgatcaaagacgcg
ctggctcaatcgaaagaagctcgccttgagatccttcgcaagatgctgacggccaagcca
cgtccggcagaatcactttctcagtacgctccacgcttgctgcagactcagattcagtct
gacaagatcggcatgctgatcggtcctggcggaaagaacattcgtgccattcaggaagaa
acagaaaccgttatcgaagttgctgaagacggcaaggtaacaatttccggtaccaacggc
gaactcgctgatatcgcactcaagaaagttgaagcttgcacggcaacggttcaggtcggc
aagatctacgatggcgttgtcagcagcaccaaagaattcggtgcctttgttgagatcctt
cctggtcgtgacggattgtgtcacatcagcgaactttctaacggctacatcagtgatgtt
tcagacgtttgcaccgttggcgatgagatgaaagttctcgtgatcgatgtcgatggcaac
gatcgcgtcaagctcagccgtcgtcgtgctttggaagagcttggtctcgaagacgaattc
gccgaagaggaagacaacgacgatttcgatggcggaagcgacgatgacttcgacggcgac
gatgaaggcgacgacaatgatcgcggcggacgctcagatcgtgatcgcggtggcgaccga
ggtggtcgtggcggaagtgatcgtggtcgcagcggtggcggcggtggtcgtggtcgcagt
ggcggcggagaccgtggtggacgcggtcgcagtggcggcggcggtggacgtggtcgcggt
ggccgtggagacagcgatcgtggcggacgcggcgacagcgatcgtggaggccgtagcgat
agtgaccgaggtggtcgtggtcgtagcgacagtgaccgaggtggtcggggtcgtagcgat
agtgaccgaggtggtcgtagtcgtggcgatagcgatcgtggtggacgcagcgacagtgat
cgcggcggacgcggtcgtggcgatagtgatcgtggtggacgcagcgatagtgatcgcggt
gaacgcacagaaggtgatcgcggcaaccgaggtggctcgggcggcggtggcggagactat
gatcgtcctcgtggcggcggcggtcgaggccgtggtcgcagcggtggacgcggccgtggc
ggttcaggcggcggtggcggcggtcgttcgcgtgacggcggcggtggtcgcagcagtggc
ggtggtgaccggggttaccgcgattaa
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